Setaria viridis (green foxtail): 117833048
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Entry
117833048 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K17925
sorting nexin-13
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
svs04990
]
117833048
Domain-containing proteins not elsewhere classified [BR:
svs04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117833048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
117833048
NCBI-ProteinID:
XP_034568303
LinkDB
All DBs
Position
8:complement(3035997..3044338)
Genome browser
AA seq
1033 aa
AA seq
DB search
MPKRMESVDDLIEEAKVRTVWWALCIFAISYFLTHTSKSMWTNVPMSILILAFLRYLSFK
VEFRWREQSARKQTYLSQVSKRQLSSNDHRLSTVPPVSRWRRKVGSPSVEAAFESFTENI
LRDFVLDLFYSDITPDREAPELIRGLILHALGEVSGRVKEMNLVDLLTRDMVDLIGNHLD
VFRKNQALIGADVMRTLSSEERDERLKQHLIVSQELHPALLSSEHEYKVLQEIVGGIMAL
VLRPQDAQSPLVRCFSRELMTCLVLQPVMNFASPIYMNELIVYLLNNNDTSNVGGNTNMS
NTGTVMVVHDRSSYKGGSQGSQKESRNLTVEPSGLVPGNNSSMRTLVTSEGGKSKVSEDD
HDSAIQPRQPDWAVRLNAATKRKSLVLAPENLENMWAIGRNYQEKMNKTDNSSRLKGSGG
DNSPSAGAVGKEISSNFNERIASVDDKYMVNLMQSTNRNVQSAFVTGSHPLALQNKNEMK
PKEMNQVNYSSKEKTHEASNSAKAELKRSSSTPDIEKRYLVKSNQPMVSSESGNARKNQD
EKVVGLASHGEVVLHAPKIRCRVVGAYFEKLGSKSFAVYSIAVTDADNKTWFVKRRYRNF
ERLHRQLKEIPNYSLHLPPKSFLSSSVDDYLVHQRCILLDKYLQDLLSIANIAEQHEVWD
FLSASSKNYSAGKSTSVMKTLAVNVDDAMDDIVRQFKGVSDGLKRAVGTPPSSATAQFTD
NRMSLSWNHEETDNQNLHHRNFERARSLSDGDSNYEDLTSSANSGCHSDNEVNNKGHTSN
DTKHIETYSGLDTQVSGQIQKPVRAYSDSSNMSSLNTFEYPTGIPPEWMPTNVSVPLLNL
VEKVFQLKRRGWIRRQVLWISKQILQLVMEDAIDEWIIRQINWLRRDDVIVQVIRWIQDT
LWPNGIFFTKLDGYKGNSGISQFDKQSSGTGTSKKSCANSFEFQLEASRNASEVKKLLLD
GTPSTLVSIIGYKQYRRSARDMYYFLQSNVCVKQLSYAMLEQAIVTIFPELRQLIDDIHE
KGRKEQASFTYQL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaggatggagagcgtggacgatctgatcgaggaggccaaggtgcgcaccgtc
tggtgggcgctctgcatcttcgccatctcctacttcctcacgcatacaagtaaatcaatg
tggacaaatgtgcccatgtcaatccttatacttgcatttctccgatatctctccttcaaa
gtggagttccgttggagggaacagtctgcacgtaagcagacatatttgtctcaagtgtca
aagaggcagttgtcttctaatgatcatcgactgtcaactgtgccaccagtttcaagatgg
agacggaaagttggctcaccttcggttgaggctgcttttgaaagtttcactgagaatatt
ttgagggactttgttttggacttgttctattcagatattactcccgacagggaggccccg
gaactgatacggggcttaatactccatgctcttggtgaagtatcaggcagggtgaaagag
atgaatctagttgacttgctaacaagggatatggttgatttgattggaaaccatttagat
gttttccggaaaaatcaagctctgattggtgctgatgttatgaggacgttgtcttccgag
gaaagagatgagagactgaagcagcacctaatagtttcacaggaacttcatccagcacta
ttatcttcagagcatgagtacaaggttcttcaagaaattgtggggggcattatggctcta
gttttgagaccacaagatgctcagagtccactagttcgctgtttctccagggaactcatg
acctgcctagtcttgcagccagtgatgaacttcgctagtccaatctatatgaacgagtta
attgtctaccttctaaacaacaatgatacgagcaatgtaggaggcaatacaaacatgtct
aatactggaactgtgatggtagtgcatgatcgttcgtcgtacaaaggcggttcacaaggt
tctcaaaaggaatcaaggaatttgactgtagaaccaagtggtttagttccaggaaataat
tccagcatgaggacacttgttacatctgaaggtggaaagtcaaaagtgtcagaggatgac
catgacagtgccatccagcctcgccaaccagactgggcggtgcgattgaatgcagctact
aaaagaaaatcactggttcttgcccctgagaatcttgagaacatgtgggcaataggaaga
aattaccaggagaaaatgaataaaacagacaattcatcaagattgaaaggttctggaggt
gataacagtccaagtgcaggggcagtgggtaaagagatctcttcaaacttcaatgagaga
attgcatctgttgatgataaatacatggtcaacttgatgcaaagtaccaataggaatgtt
caatccgcttttgtcacaggcagtcatccccttgctttacaaaataagaatgaaatgaaa
ccaaaagagatgaatcaagttaattacagcagcaaggaaaaaacacatgaagcaagcaac
agtgcaaaagctgaactaaagcggtctagtagtactcctgatattgaaaaaagatatttg
gtcaaaagtaaccaacccatggtttccagtgaaagtggaaatgcaaggaaaaatcaggat
gagaaagtcgttggtcttgcctctcatggtgaggtagtattgcatgctccgaagataaga
tgccgggttgttggtgcatatttcgagaaactaggttcaaaatcttttgcagtttattct
attgctgtgactgatgcagataacaagacctggtttgtgaaaagaagataccgaaatttt
gagcgtcttcatcgacaactgaaggagattcctaattattcattacatctgcctccaaag
agttttctttcatctagtgttgatgattaccttgtgcaccaacgatgcattctcctggac
aaatatcttcaagatctcttgtctatagcgaatattgcagagcagcatgaagtttgggat
tttctaagtgcatcatcaaagaattactctgctggaaagtccacctctgttatgaaaact
ttggctgttaatgttgatgatgcgatggatgacattgttcgacaatttaaaggagtttca
gatggtttaaaacgggcggttggcacgccaccttctagtgccactgcacaattcacagat
aatagaatgtctctatcttggaaccacgaggagacagataaccaaaatttgcatcataga
aactttgaaagggctcgtagcctttctgatggtgatagtaactatgaagatctcacctca
tctgcaaatagcggatgccactcagacaatgaggtgaacaataaagggcatacttcaaat
gatactaagcacattgaaacatactctggtttggatacacaagtcagcggacagatacaa
aaacctgtgagggcatattctgattcttcaaacatgtcatctcttaatacattcgagtat
ccaacaggaattcctcctgagtggatgccaacaaatgttagcgtacctttattgaacctg
gttgaaaaggtattccagctaaagcgacgcggttggatacggagacaagttctttggata
tcaaaacaaattttgcagttggtcatggaagatgcaatcgatgaatggattataagacaa
atcaattggctccgaagagatgatgtcattgttcaagtaatacgttggattcaagatacc
ctttggcctaatggtatattcttcaccaagttggatggatataaagggaattccggcata
agtcaatttgacaagcagtcatctggaactgggacttccaaaaagagctgtgcaaactca
tttgagtttcaacttgaggcatctagaaatgccagtgaagttaagaaacttcttttagat
ggaactccatctaccttagtcagcataattgggtacaagcagtaccgacgtagtgcaagg
gacatgtactacttcctccaatccaacgtctgtgttaagcaactatcgtacgcgatgtta
gaacaggcgatcgtaacaatcttcccagagcttcgtcaactaattgacgacatccacgag
aagggccgcaaggagcaagcctcattcacataccaactctga
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