Setaria viridis (green foxtail): 117833103
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Entry
117833103 CDS
T07951
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117833103
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
NB-ARC
PK_Tyr_Ser-Thr
LRR_14
WH_DRP
Rx_N
LRR_8
LRR_4
AAA_16
AAA_22
ABC1
AAA_33
Kinase-like
ATPase_2
LRR_13
NPHP3_N
AAA_18
AAA_14
Motif
Other DBs
NCBI-GeneID:
117833103
NCBI-ProteinID:
XP_034568381
LinkDB
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Position
8:10620898..10627647
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AA seq
1256 aa
AA seq
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MKSWTDDHPRKLQYSLVKEITNNFTDELGRGAFGRVFKGLLDDGEEVAVKVLRYFTPEIS
DQQFQNEFGNLKKLKHPNIVRLLGFCDETEEEIIEHKGKLVVCYRIHRALCLEYVPNGNL
RKFLSGGCLSKNWPIRYKIIKGICEGLQYLHKIPIFHFDLKPDNILLDEKMLPKITDFGL
SRLIGEGNTKKTMTPLGTVGYLPPEFIDNQIISREYDIYSLGVIIMQIITGVTSFSDFAD
MEPQEFIEHVHDNWKRSLEEIPEYASLEADCKQVKRCMEIAINCRKKKRHERPTIEDIVS
KLDEMESKLDEMETVKIDTQLSIKKGYFEKSSGILGRPCQLQSAGAVLLAVTKIGSILGD
ETSKAVIYKLSGKVHSLKELPWKVDQIRKKLTFMSQIIQQIGTVYLTDELVNNWIGEVRK
VAYRVEDVVDKYSYHVFQLMQEGFLKKFFIKGTHYSIVFSAITDEIADIEEEINQVIHMK
DNWLHETQLVSNHQQLAEIERHRSEEQMAKAVLLVVIHDDLVGIEENRRLLTGWLNSDEQ
ITRLITVSGMGGLGKTTLVTNVYEREKNNFTTHAWIVVSQNYDVVKLLRKLLRKIGEPEQ
SQLVDLDARDLKAKVKERLAGRKCLIVLDDVWNQEAYTQIRDAFQNLQASCVIITTRQEQ
VAVLAHPTRQLKLKPLDHGDAHVLFCRKAFYNTINCSCPDELEKLANNIVDRCQGLPLAI
VTMGGLLSALPPIKQVWNETYKQFQDQLTNNDHVRAILNLSYHDLPGNLRNCFLYCSLYP
EDHLMSRESLVWLWVAEGFALQNEQSTPEEVADRYLRELIQRNMLEAVENDELGRVRTCK
MHDLVRDLALSVAKEEKFGFAYDFGTLVKMDKGVRRLSSCGWQDKTSLKVEIQLPRLRTA
VALGIIGSSPQLLSSVLSESTYLTVLELQDSEISEVPASIGNMFNLRYIGLRRTRVKSLP
ESIGKLSNLQTLDIKATKIEKLPRSVVKIKKLRHLLADRFADEKQSEFRYFIGVQAPKEL
SNLEELQTLETLEANKDLAEQLIKLTKLRSVWIDNISAADCANLFSILSKMPLLSSLLLS
TSDENETLHLENLKPASENFHRLIIRGCWADKTLECPVFRDSGRNLKYLAISWCHLQEDP
LQLLAPYVPNLTYLSLNRVSTADTLVLSKGCFPQLKTLVLKRMPNVDKVEIRVGALQQIE
GLYVVSLLKLDKVPQGIESLRSLKKLWLLSLHKDFRGHWDSKKMQQKMQYVQELRI
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttggacagatgaccatccaaggaagctacaatactcattagttaaagagatt
acaaataattttacagatgaacttggacgcggtgcatttggacgtgtgtttaaggggctg
cttgatgatggagaagaggttgctgtgaaggtgcttcgttatttcacgcctgagatcagt
gaccagcagttccaaaatgaatttggaaaccttaagaagctcaagcatcctaatattgta
cgattgttggggttctgcgatgaaactgaggaagaaattattgagcacaaaggaaaatta
gtagtttgttataggatacacagggcactgtgtcttgagtatgtgcccaatggaaacctt
cgcaagtttctttcaggtggatgtcttagcaagaattggcccatacgctacaaaataatt
aagggaatctgcgagggtctacagtaccttcacaagattcccattttccattttgactta
aaacctgataatatactgctagatgagaagatgttgccaaaaatcaccgattttggttta
tctaggctcattggtgaagggaacaccaaaaagacaatgacgcctctagggacagttgga
tacttgcctccagagttcattgacaatcaaataatctccagggaatatgacatatatagt
ttaggtgttataattatgcagataatcactggtgttacaagcttctctgattttgctgac
atggagccccaagaatttattgaacatgtacatgacaactggaaaagaagtctagaagag
atcccagagtatgcgtcacttgaagcggattgcaaacaagtgaaaagatgtatggaaatt
gcaataaactgcaggaagaagaagcgtcatgaaaggcctacaatagaggatattgtcagc
aaattagatgagatggaaagcaaattagatgagatggaaactgttaaaattgacacgcag
ttgtcaattaaaaagggttactttgaaaaatctagtggcatcctgggcaggccatgtcaa
ttacaatcggctggagcggtactccttgctgtcacgaagattggttccattttaggagat
gaaacctccaaggctgttatatataagctgtctggaaaagttcattctctgaaggaactg
ccatggaaagtcgatcaaataaggaagaaactgacattcatgagccaaattatacagcag
attggaacagtttacctcacagatgagcttgtcaataattggatcggggaggtccggaag
gtggcttaccgtgttgaagatgtagtagacaaatactcataccatgtttttcaactgatg
caagaagggttcctgaagaagttcttcatcaagggaacccattattccattgttttcagc
gcaattacagatgagatagctgatatagaagaggagattaaccaagttattcatatgaag
gataattggttacacgaaacacagcttgtctctaaccatcaacaacttgctgagattgaa
agacatcgctcggaagaacaaatggcaaaagctgtactccttgttgttattcacgatgat
cttgtgggaattgaagaaaacaggagactgctgactggatggttgaactcagacgagcaa
attaccagattaataacagtatctggtatgggtggattggggaaaaccacccttgtcaca
aatgtgtacgagcgggagaagaacaatttcaccactcatgcttggatcgttgtatctcag
aattatgatgtggttaaattgctgaggaaactgctgaggaagattggggagccagaacag
tcacagctagtggatttggatgcccgtgacttgaaagcaaaagtaaaggaaagactagct
ggtaggaagtgcttgattgtactggatgatgtatggaatcaagaagcatacactcagata
agggatgcattccagaacctccaagcaagttgtgttatcatcacgacgcgacaggaacag
gtcgcagtccttgctcaccccacccgtcaactcaaactcaagccattggatcacggtgat
gcacacgtgctgttttgcagaaaggctttctataacaccataaattgcagctgccccgat
gaacttgagaagctggccaacaatatagtggataggtgtcaaggacttccacttgcaatc
gtaaccatgggtggcctgctgtctgcactgccaccaattaaacaagtttggaacgaaaca
tacaagcaatttcaggatcagctgacgaacaatgatcatgttcgtgcaattctaaatctg
agctaccacgacttacctggaaatcttagaaactgcttcctttattgtagcttgtaccct
gaggatcacctaatgtcacgagagagccttgtttggctatgggttgcagaaggttttgcg
cttcaaaatgaacaaagcacaccagaggaggtggccgacagatacctacgggaactgatc
caaaggaatatgctggaagctgttgagaacgatgagctaggaagggtccgcacctgtaag
atgcatgaccttgtacgtgacctggcactatctgttgctaaagaggagaagtttggtttt
gcgtatgattttggcacattggtgaagatggacaagggtgttcgtcgcctgtcttcctgt
ggatggcaggacaaaacttcactgaaagttgaaattcaactgccacgccttcgaaccgca
gttgcactcggaataattggatcctcccctcagttgttatcttcagttctttctgaatcc
acgtacctgacagttctcgagttgcaagattctgaaataagtgaagtgccagcatccata
ggaaatatgtttaatctacgctacattggtctgcgtcgcacaagagttaaatcactccca
gaatcgattggaaagctctccaacctccaaacactggacataaaggcaacaaaaatagag
aagctaccaagaagtgttgttaaaatcaagaagttacggcaccttctggcagacagattt
gcagatgagaagcagtcagagttccgatacttcattggagtgcaagcaccaaaagagcta
tccaacttggaagaacttcagactctagaaactttggaagccaacaaggacctggctgag
cagctgataaaacttacgaaactaaggagtgtgtggattgacaacataagtgcagcggat
tgcgcaaaccttttctctatactgtcaaagatgcctcttctttccagcttgcttctctct
acaagtgatgagaacgagacacttcatttggaaaatctgaagccagcatctgaaaacttc
cacagattgataatcagagggtgctgggcagataagacacttgagtgccctgtattccgt
gacagtggcagaaatctcaaatatctagctattagctggtgccaccttcaggaagatcca
ctgcagctgcttgcaccttacgtgccgaatctcacctatcttagtcttaacagggtgagt
actgcagacaccttagttctttctaaagggtgcttcccacagctgaagacgcttgtcttg
aagcgcatgcccaatgttgacaaggtggagatcagagtcggtgcccttcaacagatcgag
ggtttatatgttgtgtcacttctaaagctcgacaaggtcccccaaggtattgaatccctt
cgttctcttaagaaactgtggctgctgagtttgcacaaggacttcagaggtcattgggat
agcaaaaagatgcagcagaagatgcagtatgttcaagagctccgcatctga
DBGET
integrated database retrieval system