Setaria viridis (green foxtail): 117833232
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Entry
117833232 CDS
T07951
Name
(RefSeq) probable E3 ubiquitin-protein ligase ATL45
KO
K22378
E3 ubiquitin-protein ligase RNF181 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117833232
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117833232
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117833232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_4
FANCL_C
zf-RING_Vps41
zf-Nse
PHD
FAR1_N
RINGv
PHDvar_NSD
zf-RING_16
Baculo_RING
VPS18_RING_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
117833232
NCBI-ProteinID:
XP_034568553
LinkDB
All DBs
Position
8:complement(1795549..1796007)
Genome browser
AA seq
115 aa
AA seq
DB search
MARLPSGGYPPPGGRQRPDLQACSSRRAAASSDAILGLQEVGAGDATQTECAVCLQDLNA
EETLRAMPCSHAFHQHCIFDWLRRNGACPLCRHQLLPAEQEDIGSQQLSRPVPED
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcttccgtcgggtggttacccaccacctggtggtcgtcaacggccggacctg
caagcgtgctcgagccgacgagctgccgcctccagcgacgccatcctgggcctgcaggag
gttggggcgggtgacgcaacgcagacggagtgcgccgtgtgcctgcaggacttgaacgcg
gaggagacgctcagggcgatgccctgctcccacgccttccatcagcactgcatcttcgac
tggctccggcggaacggcgcctgccctctctgtcgccaccagctgctgcccgcggagcag
gaggacattggctctcagcagctgagcaggcccgtaccagaggactaa
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