Setaria viridis (green foxtail): 117833233
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Entry
117833233 CDS
T07951
Name
(RefSeq) protein transport protein SEC23 E
KO
K14006
protein transport protein SEC23
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117833233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117833233
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117833233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
TopoV_HHH
Vps36-NZF-N
DarA_N
Motif
Other DBs
NCBI-GeneID:
117833233
NCBI-ProteinID:
XP_034568554
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Position
8:20073803..20081089
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AA seq
791 aa
AA seq
DB search
MSAADPSAAPPAAAADPDGPDAVRLTWNAWPRSKVEASRCVVPLAATVSPARVPDPSAAA
PPPLPYPPLRCKPPCSALLNPFARVDFAAKIWICPLCFSRNHFPPHYAAISESNVPAELF
PQCSTVEYIVGGAPGAPGAAGAPPPPVFLFVIDTCVIEEELDYVKMAMRKAVALLPEHAL
VGLVTFGTQVHLHELGFSDLSKIYVFRGTKEISKEQILDQLGLAGAGRPGFPKMPQQPGG
PQVNGMHPATTAGVNRFLLPVSECECTLSTLLDELQPDQWPVEAGNRAIRCTGVALSVAA
GLLGACMPGTGARIIALLGGPCTEGPGMIVSKDLSEPVRSHKDLDKDAAPHFQKAVKFYD
VLAKQLVSQGHVLDVFASALDQVGLAEMKVAIERTGGLVVLSESFGHSVFKDSFKRIFEG
GEQSLGLSFNGTIEINCSKDIKVQGIIGPCTSLEKKGALCADTIVGQGNTTAWKMCGLDR
STSLTVFFDVSPSERSSQPGHQNPHLYIQFVTSYQHPEGQMRIRVTTICRKWVDGSTNTE
ELVEGFDQETAAVVLARYISLKMEMEEEFDATRWLDRSLIRLCSRFGDYRKDDPSSFSLH
SNFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRETVTNSVAMIQPSLISFSFDSP
PSPVFLDVASIAADRILLLDAYFSVVIFHGMTIAQWRNMGYQNQPEHEQFAQLLQAPHEE
AQMIIKGRFPVPRLVVCDQHGSQARFLLAKLNPSSTYNSAHDVAPGSDIIFTDDVSFQVF
CEHLQRLAVQS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccgacccttccgcggcgccgcccgcggcggccgccgacccggacggcccc
gacgccgtccgcctcacctggaacgcctggccgcgctccaaggtcgaggccagtcgctgc
gtcgtgccgctcgccgccactgtctcgcccgcgcgcgtcccggacccctccgccgcggcc
ccgccgccgctgccatacccgccgctccgctgcaagccgccctgctctgccctcctcaat
cccttcgcgcgcgtcgacttcgccgccaagatctggatctgcccgctctgcttctcccgg
aaccacttcccgccgcactacgccgccatctccgagtccaacgtcccggccgagctcttc
ccgcagtgctcaaccgtcgagtacatcgtcggcggcgcccccggcgcccccggggccgcc
ggagccccgccgccgcccgtcttcctcttcgtcatcgacacctgcgtcatcgaggaggag
ttggattacgtcaagatggccatgcggaaggccgtcgcgctcctaccggagcacgcgctc
gtcggcctcgtcaccttcggcacgcaggtgcacctgcacgagctcggattctccgatctc
agcaagatctacgtcttccgggggaccaaggagatatccaaggagcagattttggatcag
ctggggctggccggcgccggccgcccgggcttccccaagatgccgcagcagccaggtggg
ccgcaggtgaacgggatgcatcccgccacgacggccggggtgaacaggttcctgctccca
gtgtcggagtgcgagtgcacgctcagcacgttgctggacgagttgcagcccgatcagtgg
ccagtggaggctgggaaccgtgcgatccggtgcacgggtgttgccctgagcgtggcagct
gggttgcttggtgcttgcatgcctgggacaggtgcaagaattattgcattgctcggtgga
ccctgcactgagggccctggaatgattgtttcgaaggatttgtcagagccagttagatca
cataaggatcttgacaaggatgcagctcctcacttccagaaagccgtcaaattttatgat
gtccttgccaaacagttggtcagtcaaggccacgtgttagatgttttcgcatctgctctt
gatcaggttggactagctgagatgaaggttgcaattgagagaaccggtggccttgtcgtc
ttatctgaaagttttgggcattccgtattcaaggattctttcaaacgcatttttgaagga
ggtgaacagtctctaggtctttcattcaatggcacaattgaaataaactgttcaaaagac
attaaggtccaaggtattattggaccatgtacatctttggagaagaaaggagctttgtgt
gccgacacaattgttggtcaaggaaatacaacggcatggaaaatgtgtggtctcgataga
agtacttccttgacagttttttttgatgtctcaccaagtgaacgatcgagccaaccagga
caccaaaatccgcatttgtatatacaatttgtaacaagttaccaacacccagaaggccaa
atgaggataagagttactacgatatgcaggaaatgggtggatggttccactaataccgag
gaattagtcgaaggttttgaccaggagactgcagctgttgtgttggcaagatacatctct
ttaaaaatggagatggaggaagagttcgatgcaacacggtggcttgatagatctctgata
cggctttgttcacgatttggggattatcgaaaggatgacccctcttcatttagcctacat
tcaaatttctcattgttccctcagtttatgtttaacctgcggcgttcacaatttgtccag
gttttcaataatagtccagatgagacagcttattttcggatgttactcaaccgtgagact
gtcaccaactctgttgccatgatccagccttcattaatatcattttcttttgattcacct
ccttcaccagtattccttgatgtggcatcgatagcagcagaccggatactgctacttgat
gcatactttagtgttgtcatcttccatggcatgacaattgctcagtggagaaacatgggt
taccagaaccaacctgagcatgagcaattcgcacaactgttacaagcaccccatgaggag
gcgcagatgataataaaaggtcgatttccagttccaagactagttgtttgcgaccaacac
ggctcgcaggcaaggttcttattggctaagctgaatccatcgtccacatataactcagct
catgatgttgcccctggttctgacatcattttcaccgatgatgttagcttccaggtcttc
tgcgagcaccttcaaaggctggctgttcagtcttga
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