Setaria viridis (green foxtail): 117833481
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Entry
117833481 CDS
T07951
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
svs04120
Ubiquitin mediated proteolysis
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117833481
04120 Ubiquitin mediated proteolysis
117833481
09126 Chromosome
03083 Polycomb repressive complex
117833481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117833481
04121 Ubiquitin system [BR:
svs04121
]
117833481
03036 Chromosome and associated proteins [BR:
svs03036
]
117833481
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
117833481
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
117833481
Cul7 complex
117833481
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
117833481
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
117833481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
BTB
Motif
Other DBs
NCBI-GeneID:
117833481
NCBI-ProteinID:
XP_034568880
LinkDB
All DBs
Position
8:21351709..21353852
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AA seq
176 aa
AA seq
DB search
MAAEGEKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVI
EYCNKHVHAAAAAAAASKAGSEDAGATAANSTAASGEDLKNWDADFVKVDQATLFDLILA
ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagggcgaaaagaagatgatcacgctcaagagctccgacggcgaggagttc
gaggtggaggaggcagtcgcaatggagtcgcagaccatccgccacatgatcgaggacgac
tgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatc
gagtactgcaacaagcacgtccacgcagcggccgccgcggccgccgcgtccaaggccggc
tccgaggacgcgggggccaccgccgccaacagcaccgcggcctcaggcgaggacctcaag
aactgggacgccgacttcgtcaaggtcgaccaggccaccctcttcgacctcatcttggct
gcaaactatctcaacatcaagggtctgctggacctgacctgtcagactgttgctgacatg
atcaagggcaagactcctgaggagatccggaagaccttcaacatcaagaacgacttcacc
cctgaggaggaagaggagatccgcagagagaaccagtgggccttcgagtag
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