KEGG   Setaria viridis (green foxtail): 117833481
Entry
117833481         CDS       T07951                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03083  Polycomb repressive complex
svs04120  Ubiquitin mediated proteolysis
svs04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117833481
   04120 Ubiquitin mediated proteolysis
    117833481
  09126 Chromosome
   03083 Polycomb repressive complex
    117833481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117833481
   04121 Ubiquitin system [BR:svs04121]
    117833481
   03036 Chromosome and associated proteins [BR:svs03036]
    117833481
Membrane trafficking [BR:svs04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    117833481
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     117833481
   Cul7 complex
     117833481
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117833481
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     117833481
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 117833481
NCBI-ProteinID: XP_034568880
LinkDB
Position
8:21351709..21353852
AA seq 176 aa
MAAEGEKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVI
EYCNKHVHAAAAAAAASKAGSEDAGATAANSTAASGEDLKNWDADFVKVDQATLFDLILA
ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE
NT seq 531 nt   +upstreamnt  +downstreamnt
atggcggccgagggcgaaaagaagatgatcacgctcaagagctccgacggcgaggagttc
gaggtggaggaggcagtcgcaatggagtcgcagaccatccgccacatgatcgaggacgac
tgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatc
gagtactgcaacaagcacgtccacgcagcggccgccgcggccgccgcgtccaaggccggc
tccgaggacgcgggggccaccgccgccaacagcaccgcggcctcaggcgaggacctcaag
aactgggacgccgacttcgtcaaggtcgaccaggccaccctcttcgacctcatcttggct
gcaaactatctcaacatcaagggtctgctggacctgacctgtcagactgttgctgacatg
atcaagggcaagactcctgaggagatccggaagaccttcaacatcaagaacgacttcacc
cctgaggaggaagaggagatccgcagagagaaccagtgggccttcgagtag

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