Setaria viridis (green foxtail): 117833613
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Entry
117833613 CDS
T07951
Name
(RefSeq) rab escort protein 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svs01006
]
117833613
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117833613
Prenyltransferases [BR:
svs01006
]
Protein prenylation
Rab geranylgeranyltransferase
117833613
Membrane trafficking [BR:
svs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117833613
Endosome - Lysosome transport
Rab GTPases and associated proteins
117833613
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
117833613
NCBI-ProteinID:
XP_034569071
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All DBs
Position
8:422110..426048
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AA seq
552 aa
AA seq
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MAEEPAAAGAAHEYPTIDPSFDVVLCGTGLPESVLAAACAAAGKTVLHVDPNPFYGSHYT
SIPLLSLASFLSPDPSPSSSTVAAAATSGSHTVVDLHRRTVYSEVETSGAIPELARRFTV
DLVGPRVLYCADEAVDLLLRSGGSHHVEFKSVDGGSLLYWEGCLYPVPGSRGAIFSDTTL
KHTEKFVAYKFLKVVQEHIAATSASADERGEEEDAAMISEEDLYRPFVEFLNQHSLSAKM
RAVVLYAIAMADYDQDGPEPSDKLITTREGIKTIALYLSSIGRFANAEGAFIYPMYGHGE
LPQAFCRCAAVKGALYVLRMPVAALLMDEEKKHFVGARLASGQDISCKRLIIDPSYKIPT
LDVPSDDSNSNFPRSVARGICIFSKSLKQGTSNVLVVFPPKSLEEKQVAAVRLLQLSSNL
AVCPSGMFMAYLSTPCTDASAGKHCIKKAIDALFSPQPQDSDGFEGHLESTSESTDDMKP
TLIWSCVYVQEITQGTSTSGSSWSCPMPDENLDYRNILESTKKLFADIYPDEEFLPRNSA
PVHGDDDSDSAE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcccgccgccgccggtgcggcgcacgagtaccccaccatcgacccctcg
ttcgacgttgtgctctgtggcacggggctcccggagtccgtcctcgccgccgcctgcgcc
gccgccgggaagacggtcctccacgtcgaccccaacccgttctacggctcccactacacc
tccatcccgctcctctccctcgcctccttcctctcccctgacccttccccgtcctcctcg
accgtggccgcggcagctacctctggttcgcacaccgtcgtcgatctccaccgccgcact
gtgtactcggaggtcgagacctcgggagccatccccgagctggcgaggcggttcaccgtc
gacctcgtggggccccgggtgctgtactgcgccgacgaggccgtggacctcctactgcgc
tcggggggcagccaccatgtggagttcaagagcgtggacgggggaagcctcctctactgg
gagggctgcctctaccctgtgccaggctcgaggggtgccatcttcagcgacaccacactc
aagcacacggagaagttcgtcgcctacaagttcttgaaggttgtccaggagcacattgct
gccacatcagcttctgctgatgagaggggagaggaggaggatgctgccatgatatctgag
gaggacctgtaccgcccctttgttgagttcctcaaccaacatagtctttctgccaagatg
agagcggttgtgctgtatgcaattgccatggcagattatgatcaagatggtcctgagcct
tctgataaattaattacgacgagggagggaatcaagaccattgctctgtacttgtcatca
attgggagatttgctaatgcagagggtgctttcatttatcctatgtatgggcatggtgag
ctgcctcaagctttctgtcgctgtgctgcggttaagggtgccctatatgtgttgcggatg
ccagtggctgcgcttcttatggatgaggaaaagaagcattttgtaggtgccagattggca
tctggtcaggatatttcttgcaaacggttgataattgatccttcatacaaaattcctacc
ttggatgttccatctgatgattcaaattcaaattttccaagaagtgttgcgaggggaata
tgcatatttagcaagtctttgaaacagggtacatcaaatgttctggttgttttccctcca
aagtcgctagaagagaagcaggttgcagctgttcggcttcttcaattgagcagcaatctc
gcagtatgcccttctggaatgtttatggcatatctgtctactccctgtactgatgcctcc
gccggaaagcattgcatcaaaaaagcaatagatgctcttttcagtccacagccacaggat
tcagatggcttcgaaggccaccttgagtcaaccagtgaaagcaccgatgatatgaagcca
acactaatctggagctgtgtgtatgttcaagagatcacacagggaacatcaacatctggt
tcttcatggtcatgccccatgcctgatgaaaacctggattacaggaacatacttgaatcg
acaaaaaagttattcgcagatatctatcctgatgaagaattcttgcctagaaattcagct
cctgtacatggcgatgatgactctgattccgcggagtaa
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