Setaria viridis (green foxtail): 117833722
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Entry
117833722 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117833722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117833722
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117833722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
117833722
NCBI-ProteinID:
XP_034569212
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Position
1:complement(5649914..5654030)
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AA seq
416 aa
AA seq
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MSEMRPGFRPNTWPNPVFWIVRPPIRFFFLPLPLFLFQALSNLLQPSGKRKARAPLLLPE
ETQSGGFRSTLLRPLPATAAFPTASRYTGSSISREQKGITFVLETMYFEGYGYRGSTFEQ
TYRCYPASFIDKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHCGVLEF
IAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPKAILEKT
LRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEPVKP
AVPANTEPTGEAPAEEEPKFIPFTGSGRRLDGKPSKDKDMLASCPAKRQANATNSVQPST
ASTSQGGSSRKTTGKLVFGSGGNRADKAPEKEAKEEPKKEEPKFSAFTGKKYSLKG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatgcggcccggtttccggcccaatacgtggccgaatcccgtcttctggatt
gttcgccccccgattcgcttcttcttccttcctctccctctgttcctctttcaggctctc
tccaatctcctccaaccaagcggcaagcgcaaggcgcgagctcctcttcttctccccgaa
gaaacccagagcggagggttccgctctactctactccgccccctccccgcaaccgctgcc
tttccgactgcctcaagatacaccggctcgtcgatttctcgggagcagaaggggataacc
ttcgtgttggaaacaatgtacttcgaaggctatggctaccgtggaagcactttcgagcag
acatatcgctgctaccctgcatctttcattgataagccacaacttgaggccggcgacaaa
attattatgccaccgtcggctcttgatcgtcttgcatctttgcatattgaatatcctatg
ctttttgaagtccacaatgcggcagcggaacggacttcacattgtggtgttctggagttc
attgcagaagaaggcatgatctacatgccatattggatgatgcaaaatcttcttctgcaa
gagggagatatggtgttcataaaaaatgccaacctcccaaagggcacatatgtcaagtta
cagcctcatacaacagactttttagatatctcaaaccccaaagcaatcttggagaaaact
ttgcggaacttttcttgtctaaccacaggtgacagcatcatggtagcatataataacaag
aagtactacattgatatagtggagacaaaaccttccaatgctataagtattattgagact
gattgcgaggttgactttgctccaccacttgactataaagaacctgagccagtaaaacct
gccgttcctgcaaacacagagcctactggtgaggctccagctgaagaagaaccaaagttc
attcccttcactggttcaggaaggcgtctggatgggaagccttctaaagataaagatatg
ctggcctcatgccctgcaaagcgacaagctaatgcaaccaatagtgtgcagccctcgaca
gccagcacgtcacagggcggttcgtcgcgtaagaccacaggaaagcttgtctttggctct
ggtggaaatcgagctgataaggcacctgagaaggaagcaaaggaagagccaaagaaagaa
gaaccgaaattctcagcatttacgggaaagaaatactcactgaagggctga
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