Setaria viridis (green foxtail): 117833767
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Entry
117833767 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
117833767
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
117833767
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
117833767
NCBI-ProteinID:
XP_034569258
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Position
8:complement(25110929..25115384)
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AA seq
713 aa
AA seq
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MTIAAAAAAARAIRPSFLIVLLAIVAMAAASLLAAASTEAAAAGGVTLRVGSRQVVVDNG
VVQVALSAPEGRITGVSYGGEPNLLDYDAGVGDYGGYWDSVWNYPGSGLPGLYNTLDGTE
FNVVSSSEDQVELSFRSTYSPSLENSFRLNIDKRLVMLRGSSGFYCYAIFEHDGDYPALN
ITEARLVFKLNTGKFSYMAITDDIQRYMPSAVDRDEPRAVPLAYKEAVLLVDPKEPQFRG
EVDDKYQYSLDNKDNIVHGWISGGDPNPMGFWVITPSNEFKSGGPFKRELTSHVGPTSLT
MFFGTHYVGKNMVFKIDDGESWKKVLGPVFIYLNSSPKSSNDLQSLWEDAKAQAQAEARN
WPYSFLASPDFPKAHERGSITGRLLVRDRYLSKKDMPAAMAYIGLASPGQPGSWATESKG
YQFWTSATSDGAFSIDNVRGGVYNLHAFVPGVLGNYCYNSPLTIAPGGSINVGDLVFKPP
RSGPTLWEIGVPDRTAAEFYVPDPDPKYINKVFVSKDRYRQYGLWERYDALYPENDLVFT
VGKSDESKDWFFAQVTRKVGQDTVPTTWQVRFNLDRVVEDGTYALRIALAAAETCRLQVQ
VNGGARGGGNVFTTPAMGDDNAIARHGIHGLQWSFKFEIAGHLLIQGDNTIDMKLTQTGA
AAPAKIAGVMYDYIRLEGPSSGGIPTLAPLDRVWMGILFLSLVAFLAMPCPVI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagctgcggccgccgccgctgctagggccatccggccgtcgttcctcatcgtc
ctgctcgccatagtcgccatggcagcggcgtccctgctcgcagcggcctcgacggaagca
gctgccgcaggtggcgtcacgctgcgcgtcggctcgcgccaggtggtggtggacaacggc
gtggtgcaggtggcgctgtcggcgccggagggccggatcaccggcgtcagctacggcggc
gagcccaacctcctcgattacgacgccggcgtgggagactacggaggctactgggattct
gtttggaactaccccggctctggtctgccaggactgtacaatacgttggatggtacagag
ttcaacgtagtatcctcaagtgaagatcaagtggagctttctttcaggagtacatacagc
ccatcacttgaaaacagctttcgcttaaacatcgacaagaggcttgtaatgctcagaggt
agctctgggttctactgctatgccatctttgagcatgacggcgactaccctgctctgaac
atcaccgaggctcggctcgtcttcaagcttaacacgggaaagttcagttacatggctatt
acagacgacatacagaggtacatgcccagtgcggtcgacagagatgaacctcgtgccgtc
ccactggcatacaaggaggctgtgctcctggttgaccccaaggagccccagttcagagga
gaggtggatgacaagtaccagtactctctggacaacaaggacaacattgttcacggatgg
atcagcggcggcgacccaaaccccatgggtttctgggtcatcacgcccagcaacgagttc
aagagcggtggccctttcaagcgggaactcacttcccatgtcggccccacatccctcacg
atgttttttgggacgcattacgttggtaagaacatggtgttcaagatcgacgacggcgag
agctggaagaaagttctaggcccggtgttcatctacctcaactcaagccccaagagcagc
aacgacctccagtctctctgggaggacgccaaagcacaggcacaagccgaggcgaggaac
tggccctacagcttccttgcatcgccggacttcccaaaggcacacgagaggggatccatt
acaggaaggctcctcgtcagagacaggtacctgagcaagaaagacatgcctgctgcaatg
gcctacatcgggctcgcctcgcctgggcagcccggatcctgggccacagagagcaagggc
taccagttctggacaagcgccacatccgatggcgctttcagcatcgacaatgtccgggga
ggagtgtacaatctgcacgcgtttgttcccggggttctcggaaactactgctataattca
cctctaaccatagcaccaggtggttccatcaacgtcggtgacctagtgttcaagccgccg
aggtcaggcccgaccctgtgggagattggcgtcccggaccggacagctgcggagttctat
gtccctgaccctgaccccaagtacatcaacaaggtcttcgtcagcaaagacaggtacagg
caatacgggttatgggagagatacgacgccttgtacccggagaatgatctcgtcttcacc
gttggtaaaagcgacgaatccaaggactggttcttcgcgcaagttacaaggaaggtaggt
caggacaccgtgccaacgacatggcaggtacggttcaatctggaccgggttgtagaagac
ggcacctacgctctgcggatcgccttggcagctgccgaaacgtgtagattgcaggtgcaa
gtgaacgggggtgcgaggggaggcggcaacgtgtttacgacgccggcgatgggggatgac
aacgcgattgcacgccatgggatccacggacttcagtggagcttcaagtttgagatcgcg
gggcacctgctgatccaaggcgacaacaccattgacatgaaactcactcagactggagca
gcagctccggccaagatcgccggggtcatgtatgattacatccgcttagaagggccttcc
tccggaggcattccaacgttggcaccgcttgaccgggtttggatggggattttgtttcta
tctttagtggccttcctcgccatgccatgtccagtgatctag
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