Setaria viridis (green foxtail): 117833794
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Entry
117833794 CDS
T07951
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117833794
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117833794
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117833794
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117833794
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117833794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117833794
NCBI-ProteinID:
XP_034569288
LinkDB
All DBs
Position
1:34600826..34606528
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AA seq
746 aa
AA seq
DB search
MAEQDGAAGQSPLDSPPGVSAENGDENTEQHQPFFSMCQPIRSVSYANSWESCFAPAANE
NDHNSGLNSMVNDHILITSASLGSKQPQPEDISGTVDDEGKPCSPHSIDKEASLVQDVME
MEQSMDEIDVPHGEASEQPEPLSTEQPDSTGGMDLWDDKDNQKLLPLNTDRWNSSIGETC
DAEDKQFPLSFSYRRQPQSVGAGLSNMGNTCFLNATLQCITHTVPLFLKLRSTDHSTPCS
YDKDGFCSFCALKEHVDESIRRSGSVIMPAKFRDNLRKLSSDFRPGQQEDAHEFLRCLLD
NLHKCTLDPMSKGKGSSFDEESIVKDIFGGQLKSQLSCCECGHSSETFEPFLDLSLEIDQ
VDHLVDAMESFTKVEQIGDSEDKLTCERCNAQVCKNKQLTLHRAPDVIAFHLKRFTTLDN
SVEKIDKHVVYPSEVDLKPFHSNPDTVGELKYDLYGVVEHSGLPNYGHYVCSIRSSPSTW
YLMNDSHVDSITDASALNKEAYILFYVRQGKFPWFSSLLEVKDALHAEDARGASPVSVLE
NIDANCSTSSGGGSSSNSGDKLEKNEARQLEELEKDETSQYKVSFCHEEPSKRSSLGASN
INNTRDEISPPRASLQDDVVRCPRSVETTNLDRPSTPLPSKRSFSHNEFGVFEFEDFDDD
EDTPLLPDLKFHPKAKKPKAASASKAVKGPSIDQNARRLMSGMPSSRRKGLLDCMVTQQN
AHQESRSRRCPTSDPMDKKKRKLVQC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaggacggcgccgcgggacagagcccgctcgactcccctccgggggtcagt
gctgaaaatggggatgagaatactgagcagcatcaaccatttttctccatgtgccagcca
attcgctctgttagctacgcaaattcgtgggaaagctgttttgctcctgctgcaaatgaa
aatgaccacaatagtggcttgaactcaatggtgaatgaccacatcctgattacatctgct
tctcttggaagcaagcaacctcaacctgaggacatatctggtacagtagatgatgaaggc
aagccttgttcaccacattcaatcgataaggaagccagtttggtgcaagatgtcatggaa
atggaacaatcaatggatgaaattgatgtgccacatggagaagcaagtgagcagccagaa
ccccttagcacagagcaacccgattcaaccggtggaatggatttatgggatgacaaagat
aatcagaaactgttgccccttaacactgatcggtggaactccagtattggtgaaacttgt
gatgctgaagataagcagtttcctctgtccttttcttacagaaggcaaccccaatctgtg
ggagcaggtcttagcaatatggggaacacatgcttcttaaatgcaactcttcagtgcatc
actcatactgtaccactttttctcaagcttcgctcaactgatcattccactccatgctca
tatgataaagatggattctgttctttctgtgcccttaaagaacatgtcgatgaatcaatt
cgaaggtctggatctgttataatgcccgcaaagttcagagataatttaagaaagctatct
tcagattttagaccgggacagcaagaggatgcccatgaattcctacgttgcttgcttgat
aacttgcataagtgtacccttgatcccatgtctaagggcaagggctcatcctttgatgaa
gaaagtatagtcaaggacattttcggaggccaactgaaaagccagttgtcttgctgcgag
tgtggtcacagctcggagacatttgagcccttcctggatctaagcttggagatcgatcag
gttgatcacctggtagatgccatggaatcttttaccaaggtagagcagatcggggactct
gaagataagctcacctgtgaacgatgcaacgctcaagtttgtaagaacaagcagcttaca
cttcatagagcaccagatgttattgcatttcatctgaagcgttttaccacccttgacaat
tctgttgagaagattgacaaacatgtggtatacccttcagaggttgatttgaagccgttc
catagtaacccagacactgtgggggagctgaaatatgatctttatggtgttgttgagcat
tctgggttacccaactatggccactatgtgtgcagtattcgttcttcaccaagcacttgg
tacttgatgaatgactcccatgttgattcgattacagatgcaagcgcgttaaacaaggaa
gcatatattctcttctatgttcggcagggcaaatttccatggttctctagtttgctagag
gtcaaagatgccctacatgctgaggatgctcgcggtgcatctcctgtgtctgttttggaa
aatattgatgcaaactgttcaacgtcttctggaggaggcagtagcagtaattctggtgat
aaattagagaaaaatgaagccaggcagttggaggagttagagaaggatgaaaccagtcaa
tacaaagtatcattctgtcatgaggagccatctaagagaagttcacttggtgcttccaac
atcaataatacaagagatgaaatcagtccacccagagcatctctccaagatgatgttgtt
agatgtccccgtagtgtagaaactaccaatctggataggccctctactcctctgccctcg
aagcgatcattctcacataatgagtttggtgtgtttgagtttgaggactttgatgatgac
gaagacactcctttgcttccagatctgaaatttcaccctaaggcaaagaaacctaaggct
gcatctgcatctaaagctgtgaagggccccagtattgatcagaacgcaagacgtttgatg
agtggcatgccatcctcaagaagaaaaggtctcctggactgcatggtcacacaacaaaat
gcacatcaggagtctcgtagtcgcagatgccccacaagcgaccctatggacaaaaagaaa
cggaagttggttcaatgctag
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