Setaria viridis (green foxtail): 117833804
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Entry
117833804 CDS
T07951
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117833804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117833804
03036 Chromosome and associated proteins [BR:
svs03036
]
117833804
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117833804
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117833804
PBAF complex
117833804
GBAF(ncBAF) complex
117833804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
117833804
NCBI-ProteinID:
XP_034569297
LinkDB
All DBs
Position
1:complement(34804645..34806652)
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AA seq
535 aa
AA seq
DB search
MASGGNPNPTGGPPQPRPPHPQQQPQPGGSPATPMTHLRPPSLAGSPFQGLFHTPPSHNP
AFQIHMGASSPQTPLMAAAAAAAAQSAKRPPQKPPVRPPGPGSTSAAAAASAAAAYKASA
AAAAVANSGGVDLTPAARRNKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALAR
KKVDIQEALKTPPSLQRTLRIYVFNTFANQGPRAIPPPKNADPPTWSLKIIGRVLEDGAE
LDPASVVPKHNPVYPKFSQFFKRVTIALDPQLYPENPLIIWENARSAAQQEGFEVKRKGD
KEFVANIRLEMNYNPEKFKLSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPNDPSFF
MCDPQLKKVFGEDKLKFAMLSQKISQHLSAPPPINLEHKIKLSGNGASASACYDVLVDVP
FPLQKEMMAFLANTEKHKDIEACDDVISASIKKIHEHRRRRAFFLGFSQSPVEFINGLIA
SQSKDLKLVAGEANRNIEKERRADFYNQPWVEDAVIRYLNRKPANEGPGGGAGGS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcggcaaccccaacccgaccggcggcccgccccagccgcgcccgccgcat
ccccagcagcagccgcagccgggcggctccccggcgacgcccatgacccacctccgccca
ccctccctcgccggctccccgttccagggcctcttccacacgccgccgtcccacaacccc
gccttccagatccacatgggcgcctcctcgccccagaccccgctcatggcggccgccgcc
gccgcggcggcgcaatcggccaagcgccccccgcagaagccccccgtgcggcccccgggt
cccgggtctacctcggccgccgcggcggcttcggcagctgccgcgtacaaggcttcggcg
gcggcggcggccgtggcgaactccggaggcgtcgacctcacccccgccgcgcgacgcaac
aagaagcgcaagctcccggagaagcagctcccggaccgcgtcgccgcgctgctcccggag
tccgcgctctacacgcagctgctcgagttcgaggcccgcgtggacgcggcgctggcgcgg
aagaaagtggacatccaggaggcgctcaagacgccgccctcactccagcgcacgctccgc
atctacgtcttcaacaccttcgccaaccagggcccgcgcgccatcccgccgcccaagaac
gccgacccgcccacctggtcgctcaagatcatcggccgcgtgctcgaggatggcgccgag
ctggaccctgccagcgtggtgcccaagcacaacccggtgtatccgaagttctcccaattc
ttcaagagggtgaccattgcgctggacccacagctgtaccctgaaaacccactgatcatc
tgggaaaatgcgcgttctgccgcccagcaggaaggtttcgaggtgaagaggaaaggggat
aaggagtttgttgcgaacatccggctggagatgaactacaaccctgagaagtttaagctg
tcacagccgctgatggaggtgctcggggtcgaggtggacactcgcgcgcgggtgattgct
gccctctggcagtacatcaaggcgaagaagcttcagaacccaaatgacccttccttcttc
atgtgtgaccctcaattgaagaaggtgtttggggaggataaactgaagtttgcaatgctg
tcgcagaagatatctcagcatctgtctgccccaccgcccatcaacttggagcacaagatt
aagctatcaggcaatggagcttccgcaagtgcttgctatgatgtgctggtggatgtgccc
ttcccgctgcagaaggagatgatggcattccttgccaacactgagaagcacaaggacatt
gaggcctgcgacgatgtgatatctgcctcgatcaagaagatccatgagcaccgcaggagg
agggctttcttcctgggtttcagtcagtccccggtggagttcattaacggcctgatagct
tctcagagcaaagatttgaagctggtcgccggcgaagcgaataggaacattgaaaaggaa
agacgcgcagatttctacaaccaaccatgggttgaggatgctgttataagatacctgaac
cgcaagccagctaatgagggcccaggtggtggtgctggtggttcttga
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integrated database retrieval system
