Setaria viridis (green foxtail): 117833835
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Entry
117833835 CDS
T07951
Name
(RefSeq) cyclic nucleotide-gated ion channel 18 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117833835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svs04040
]
117833835
Ion channels [BR:
svs04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117833835
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
117833835
NCBI-ProteinID:
XP_034569324
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All DBs
Position
8:4915715..4918954
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AA seq
743 aa
AA seq
DB search
MAGFIHRRILPPFRRPPLPFFHPGAGAPASSLPGGAAGAAGRRPWTPRRILDPGDDAVLR
WYRLFLVTCLVGLFVDPLYFYLLHTDGLAACVSMDMGIGVLVTAVRTFADLFYLAHMILK
FRIAFVAPSSRIFGRGELVRDPDQIAKRYLKNDFIIDLAAMLPIPQMIIWFVIPAVSTSS
ANHTNNTLSMIVLIQYIPRVYLIISLNSKIVKASGVVTRTAWAGAAYNLLLYTLASHVLG
ALWYLLSVERQYSCWMEVCNNEGSSADSPSCVMGFLDCKSRENPMRQTWHNHSAIQKQCM
LPDAEYDYGLFADALNLDRNGVAFIDKYLYCLWWGFRNLSSYGQNLQNSTYKGETVFCIL
ICIMGLVFFSHLIGNMQTYLQSMTVRLEEWRVKRRDIEEWMRHRQLPPELQERVRRFFQY
KWLATRGVDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSLS
TKDAYIVREGDPVSEMLFIIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWALMPN
PSLNFPQSTRTVRSVTEVEAFALRADDLKYVANQFKRLHSKRLQHAFRYYSHQWRSWGAC
FVQGAWRRYKKRKLARELMKQEGIYYQDADDGGGAGGVGEGDGAGLGGGDGVDTDGAPLL
GEFGKAGAGAGGGAVAGATGDGADGGAGAAHLGATFLASKFAKNTKRGAAAHQKRIDDVA
GIKFPKLAKPDEPDFSLHTDDVL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttcatccaccgccgcatcctcccgccgttccgccgcccgccgctgcccttc
ttccacccgggcgccggcgctccggcatcctcgctccccggcggcgccgcgggggccgct
gggcgccggccctggacgccccgccgcatcctggaccccggcgacgacgccgtgctccgg
tggtaccgcctcttcctcgtcacctgcctcgtcggcctcttcgtggacccgctctacttc
tacctcctccacaccgacggcctcgccgcctgcgtctccatggacatgggcatcggcgtc
ctcgtcaccgccgtccgcaccttcgccgacctcttctacctcgcccacatgatcctcaag
ttccgcatcgccttcgtcgccccgagctcacgcatcttcggccgcggtgagctcgtcagg
gaccccgatcagatcgccaaacgctacctcaagaacgacttcatcatcgacctcgccgcc
atgctccccatcccgcagatgataatctggtttgtgataccagccgtgagcacgtcctcc
gccaaccacaccaacaacacgctctcgatgattgtgttgatccagtacatcccaagagtg
tacctcatcatatcactcaactccaagattgtcaaggcgagcggagtcgtcacaagaacg
gcctgggcaggagccgcctacaacctcctcctctacacactggccagccatgttcttggc
gccctgtggtacctgctgtcagtggagcgtcagtactcgtgctggatggaagtgtgcaac
aacgagggcagttcagcggacagccctagctgcgtcatgggcttcctggactgcaagagc
agggagaaccccatgcggcagacctggcacaaccacagcgccatccagaaacagtgcatg
ctcccggacgccgagtacgactacgggctgttcgccgacgccctcaacctggatcgcaac
ggggtcgcattcatcgacaagtacctctactgcctctggtgggggttccggaacttgagt
tcctatgggcagaacttgcagaacagcacctacaagggcgagacggtgttctgcattctc
atctgcatcatgggcctcgtcttcttttcacatctcatcggaaacatgcagacgtacttg
cagtcgatgacggtgcgtctggaggagtggcgcgtgaagcgtcgcgacatcgaggagtgg
atgcggcaccggcagctcccgccggagctccaggagcgggtgcgccgcttcttccagtac
aagtggctcgccacgcggggcgtcgacgaggagtccatcctgcagtccctgcccctcgac
ctccggcgcgagatccagcgccacctctgcctggccctggtccggcgcgtgcctttcttc
tcccagatggacgagcagctcctcgacgccatctgcgagcgcctcgtctcctccctgagc
acaaaggacgcgtacatcgtgcgggagggggaccccgtcagcgagatgctcttcatcatc
cgcggcgagctcgagagctccacgacggacggcggccggaccaacttcttcagctccatc
acgctccgccccggggacttctgcggcgaggagctcctcacgtgggcgctcatgcccaac
cccagcctcaacttcccccagtcgacgaggacggtgaggtcggtcacggaggtcgaggcc
ttcgcgctccgcgccgacgacctcaagtacgtggccaaccagttcaagaggctgcacagc
aagcggctgcagcacgcgttccggtactactcgcaccagtggcggagctggggcgcctgc
ttcgtgcagggcgcctggaggaggtacaagaagaggaagctggccagggagctcatgaag
caggaggggatctactaccaggacgccgacgacggcggcggcgccggcggcgtaggggag
ggagatggggcgggcctcggcggcggagacggtgtggataccgacggcgcgccgctgctg
ggcgagttcggcaaggccggggcgggggctggaggtggtgctgtcgccggagcgacgggg
gacggcgcggacggcggcgccggggccgcgcacctcggggcgacgttcctggcgtccaag
ttcgccaagaacaccaagcgcggcgccgcggcgcaccagaagcggatcgacgacgtggcc
ggcatcaagttccccaagctcgccaagcccgacgagccggacttctccttgcacaccgac
gacgtgctgtga
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