Setaria viridis (green foxtail): 117833839
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Entry
117833839 CDS
T07951
Name
(RefSeq) tyrosine decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00901
Indole alkaloid biosynthesis
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117833839
00360 Phenylalanine metabolism
117833839
00380 Tryptophan metabolism
117833839
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117833839
00950 Isoquinoline alkaloid biosynthesis
117833839
00965 Betalain biosynthesis
117833839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117833839
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117833839
4.1.1.105 L-tryptophan decarboxylase
117833839
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117833839
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GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Acetyltransf_6
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
117833839
NCBI-ProteinID:
XP_034569328
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Position
8:39285936..39287703
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AA seq
494 aa
AA seq
DB search
MGSLPLEAMMPLNPDSFAGESSAVVDFLADYYRNVDKYPVMANTQPGTIRKLLPEAAPEL
GDSMDRILDDVQRDILPGLTHWQSPSFFAYFPANASTAGFAGEMLSAGLNVVPFVWTASP
VATELEQVVVDWMASLLGLPERFHFKGGGGGVLHGSTCEAVVCTLAAARDRALSKLGHEG
ILKLVVYASDQTHATFQKGASIVGIPPANFRILRTSANSGYGLTATIVQRAIEEDVARGL
VPLYLCATVGTTGLGAIDRVRELGHVARRYGTWLHIDAAYAGSAAICPEFQGHLDGAELA
DSLSMNPHKWFLTNMDCCCLLVANPTTMTDALSTDPEYLKNVGTASKMAETVDYKDWQIA
LSRRFRAIKLWVVLRRYGAAGMRAHIRRHIQMAEWFEHVVAADERFEVVVPRNFSLVCFR
LRPRFMADKAVEALNRDLLAAVNASGRAFMTHFVVDDKFVIRLAVGGSMTEMRHVRAAWE
LLKEKANDLIATGC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccttccacttgaagccatgatgccactgaaccccgattcattcgctggggag
tccagtgccgtggtcgacttcctcgccgactactaccgcaacgtcgataagtatccggtc
atggccaacacccagccagggaccatccgtaagcttcttccggaggcagccccggagttg
ggcgactccatggatcgcatactggatgatgtgcagcgggatatcctccccggcctcaca
cattggcagagccctagcttctttgcctatttcccggcgaatgcaagcaccgcagggttc
gccggggagatgttgtcggctggtctcaacgtcgtcccgttcgtctggacggcgtcaccg
gtggccactgagctggagcaggtcgtggttgactggatggctagcctcctcggcctaccg
gagcgcttccacttcaagggaggaggaggcggtgtcctgcatgggagcacgtgcgaggcg
gtggtgtgcactctcgctgccgcgcgcgaccgtgcactcagcaagctcggacatgagggc
atcctcaagcttgtcgtgtatgcctcggaccagacccacgcaaccttccagaagggcgcg
agcatcgtcggcatccctccagcaaacttccgcatcctgcggacttcggcaaactcggga
tacggcctgaccgccaccatcgtccaaagagcaatcgaggaagacgtcgcccgcgggctg
gttcccctttacctctgcgccaccgtcggcactactggtctgggggccattgaccgagtg
cgcgagctcggccatgttgcccggcgttatggaacctggctgcacatcgacgcagcctac
gccggaagcgcagccatttgcccggagttccaaggtcacctcgacggcgccgagctcgcg
gactcgctgagcatgaacccacataagtggttcctcaccaacatggactgctgctgcctc
ttggtggcgaaccctaccaccatgaccgacgcactgtccactgacccggagtacctcaag
aatgtcggcaccgcgtctaagatggcggaaacggtcgactacaaggactggcagatcgcg
ctgtcacgccgcttccgtgccatcaaactctgggtggtgctacggcgctatggagcggcg
ggaatgcgcgcgcacatacgaaggcacattcagatggcagagtggttcgagcacgtcgtg
gcggcggacgagcggtttgaggtcgtggtgccaaggaacttctccttggtgtgcttccgc
ctccgcccgcggttcatggcggataaagctgtggaggccctcaaccgcgacctcctcgca
gcggtgaatgcaagcggccgggcgttcatgacacacttcgtcgtggacgacaagtttgtg
atccgcctagccgtgggtgggtcaatgacagagatgcggcacgtccgggccgcgtgggag
cttctcaaggagaaggccaacgacttgatcgccaccggttgttag
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