Setaria viridis (green foxtail): 117833862
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Entry
117833862 CDS
T07951
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00750
Vitamin B6 metabolism
svs01100
Metabolic pathways
svs01240
Biosynthesis of cofactors
Module
svs_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
117833862
Enzymes [BR:
svs01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
117833862
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
Motif
Other DBs
NCBI-GeneID:
117833862
NCBI-ProteinID:
XP_034569352
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Position
8:41560278..41562031
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AA seq
323 aa
AA seq
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MASDGTGVVALYGGGSGNNKVKVMDASSKSPAAAATFSVKVGLAQMLRGGVIMDVVTPEQ
ARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEA
QILEAIGVDYVDESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKG
EAGTGNVVEAVRHIRSVMGDVRALRNMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQF
AAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEILADVSSG
LGEAMVGINLSDPKVERYAARSE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacggcaccggcgtcgtggccctctacggcggcggcagcggcaacaacaag
gtcaaggtcatggacgcctcctccaagtcccccgccgccgccgccaccttctccgtcaag
gtcggcctggcgcagatgctgcgcggcggcgtcatcatggacgtcgtcacgccggagcag
gcgcgcatcgccgaggaggccggggcctgcgccgtcatggcccttgagcgagtccccgcc
gacatccgcgcgcagggaggggtggcgcgcatgtccgacccgggactcatccgcgacatc
aagcgcgccgtcaccatccccgtcatggccaaggcgcgcatcggccacttcgtcgaggcc
cagatcctcgaggccatcggcgtcgactacgtggacgagagcgaggtgctcacgcccgcc
gacgacgcgcaccacatcaacaagcacaacttccgcgtccccttcgtctgcggctgccgc
gacctcggggaggcgctgcgccgcgtccgcgagggcgccgccatgatccgcaccaagggg
gaggccggcaccggcaacgtcgtcgaggccgtgcgccacatccgctccgtcatgggggac
gtccgcgcgctgcgcaacatggacgacgacgaggtcttcgcctacgccaagcgcatcgcc
gccccctacgacctcgtcatgcagaccaagcagctgggccgcctccccgtcgtccagttc
gccgcggggggagtcgccaccccggccgacgccgcgctcatgatgcagctcggatgcgac
ggcgtcttcgtcggctccggcatcttcaagagcggcgacccggcgcggcgggcgcgagcc
atcgtgcaggccgtgacgcactacagcgacccggagatcctcgccgacgtcagctcaggc
ctcggggaggccatggtcgggatcaacctctccgacccaaaggtcgagcgctacgccgcg
cgctccgagtag
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