Setaria viridis (green foxtail): 117834125
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Entry
117834125 CDS
T07951
Name
(RefSeq) putative multidrug resistance protein isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117834125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117834125
04147 Exosome [BR:
svs04147
]
117834125
04090 CD molecules [BR:
svs04090
]
117834125
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117834125
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117834125
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117834125
CD molecules [BR:
svs04090
]
Proteins
117834125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_15
RsgA_GTPase
AAA_21
DUF87
AAA_30
DUF815
APS_kinase
SRP54
Motif
Other DBs
NCBI-GeneID:
117834125
NCBI-ProteinID:
XP_034569637
LinkDB
All DBs
Position
1:complement(26994878..26999755)
Genome browser
AA seq
1260 aa
AA seq
DB search
MPASSPDMDGEATEKEAAPAPAPPPAGGSPSMSVFAHADKVDVVLMLLGLVGAVGDGISY
PLTLILFIRITNDIGHGPDLLQEFSSRINASARNLVFLALAFWVMAFLEGYCWARTAERQ
ASRMRARYLQAVLRQDVEYFDLRTGSMSEVITGVSNDSLVIQDALAEKLPNFVMNAAMFL
GCYVLALAAVWRLTLVALPSVLLLVVPGIVYGRILVGIARRIREQYARPGAIAEQAVSSA
RTVYSFAAERSTVARFAAALEESMQLGLKQGLAKGLAIGSNAVTFAISAFTLWYGSRLVM
YHGYQGGAVFSVSSAIVNGGLALGSGLSSVKYLSEAISAAERIQEVIRRVPKIDSGSDAG
EDLPNVAGDVEFKNVEFCYPSRPESPVLVSFSLRVPAGRTVALVGSSGSGKSTVIALLER
FYDPSSGEVLLDGVDIRRLRLKWLRAQMGLVSQEPVLFATTIRENILFGKEDATAEEVIA
AAKAANAHDFIAQLPQGYDTQVGEGGIQMSGGQKQRIAIARAIVKSPKILLLDEATSALD
TESEHVVQEALDLASTGRTTIIIAHRLSTIRNADMIVVMQCGEVMELGSHDELVGNEDGL
YKSLTQLQQTSYSSEVDKANGVSSASFDVGQSNSHNMSRRFSSASRPSSVQSLGDTRDDN
AEKLTLHAPSFKRLLMLNAPEWKQAVMGSFSAIVCGGIQPAHAYGLGSVVSAYFLTDHAE
IKEKTRTYVLFFVALAVASFLLSIVQHYNFGVMGERLTKRIREHMLTKILTFEIAWFDHE
ENSTGAICSQLAKDANAVRSLVGDRMALAIQVVSSVLVSWTMGLVIAWRLAVVMIAAQPL
IIIGFYARRALLKNMSKRSIRAQSEGSKLAAEAISNFRTVTAFSSQDHILHLFEETQDGP
RKENIRQSWFAGLVLGTSLFIITCSFALDFWYGSKLMVERRITAKQLLQTFIIIVMTGRL
IGEAGSMATDLAKGADAVAYVFAVLDRKTEIDSDNPEGYIPSKLKGEVEMLDVDFAYPSR
PDVIIFKGFSLSIQPGKSTALVGKSGSGKSTIIGLIERFYDPTAGVVKIDSRDIRSYNLR
ALRQHIGLVSQEPALFAGTIKENIIYGTATASEAEIESAAKSANAHDFISSLKDGYNTSC
GERGFQLSGGQKQRVAIARAILKNPAILLLDEATSALDSASEKVVQKALDRVMVGRTSVV
VAHRLSTVQNCDKIAVLEGGRVVEDGTHASLMGKGRSGMYFGLVSLQQGATGTEIFASQE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgagctctccagacatggatggagaggcaaccgagaaggaggccgcgccggcg
ccggcgccgccgccagcaggggggtcgccgtccatgtcggtgttcgcgcacgcagacaag
gtggacgtggtcctgatgctgctaggcctggtgggcgctgtaggcgacggcatatcgtat
ccactgacgttgatcctgttcattcgcatcaccaacgacattggccacggccccgacctc
ctccaagagttcagctccaggatcaacgcgagcgcgaggaacctcgtcttcttggcatta
gctttctgggtcatggcgttcctagagggttactgctgggcgcggacggcggagcggcag
gcgtcgcggatgcgggcgcggtacctccaggcggtgctccggcaggacgtggagtacttc
gacctcaggaccggctccatgtcggaggtgatcaccggcgtctccaacgacagcctcgtc
atccaggacgcgctggccgagaagctcccaaacttcgtgatgaacgccgccatgttcctc
gggtgctacgtcctcgctctcgcggccgtgtggaggctgacgctggtggcgctgccgtcc
gtgctgctgctcgtcgtccccgggatcgtctacggccgcatcctcgtcggcatcgcgcgc
cggatcagggagcagtacgcgcgcccgggcgccatcgcggagcaggccgtgtcgtcggcg
cgcaccgtgtactcgttcgcggcggagaggagcaccgtggcgcggttcgccgccgcgctc
gaggagtccatgcagctggggctcaagcaggggctcgccaagggcctcgccattggcagc
aatgccgtcaccttcgccatctcagcgttcaccctctggtacggcagccgcctcgtcatg
taccacggctaccagggcggcgctgttttcagtgtctccagcgccatcgtcaatggcggc
ctggcgttggggtcggggctgtcgagtgtgaaatacttgtcagaggcaatctcggcggca
gagaggatccaggaggtgatccggcgggtgcccaagatcgactcggggagcgacgccggc
gaggacctgcccaatgtcgccggcgatgtggagttcaagaacgtcgagttctgctaccca
tcgcggccggagagccccgtcttggtgagcttcagcctgcgcgtgccagcggggcgcacc
gtggcgctggttggcagcagcggatcggggaagtcaacggtgatagcactactggagcgt
ttctatgacccatcatccggggaggtcctgctggacggcgtcgacatccggcggctgcgg
ctcaagtggcttcgcgcgcaaatgggtctcgtcagccaggagccggtgctgttcgcgacg
acgatacgggagaacatactgttcggcaaggaagacgccaccgcggaggaggtcatcgcc
gctgccaaggctgccaacgctcacgacttcatcgcccagctgccgcagggctacgacacc
caggtgggtgaagggggtatccagatgtccggagggcagaagcagaggattgctattgcc
agagcaatcgtcaagtcacccaagatccttctcctggatgaagccactagtgcattggac
acggaatcagagcatgttgtgcaagaggcgcttgacctagcctccacggggcggactact
attattattgcacatcgcctctcaaccatccgaaatgcagacatgatcgtcgtcatgcaa
tgtggtgaagtcatggagctaggctcccatgatgagcttgttggcaatgaagatggcctc
tacaaatcgcttactcaacttcagcaaaccagttactcgagtgaggttgacaaggccaat
ggagtcagcagtgcatcttttgatgtcgggcagtccaacagccacaatatgagcaggagg
ttctcttctgctagcaggccaagctcggttcagtcgctgggtgacacgagagacgacaac
gccgagaagctcacccttcatgctccgtccttcaaaagactacttatgcttaatgcacca
gagtggaagcaggcggtgatgggcagctttagcgcaattgtgtgtggaggcatccagcct
gctcatgcgtatggcttggggagtgttgtctctgcttacttcttgacagaccatgctgag
atcaaggaaaaaacaaggacctatgtgctcttcttcgttgctcttgcagtggcatcgttc
ttactaagtattgtacagcactacaactttggtgtcatgggggaacgtctcaccaagagg
ataagagaacatatgctcacaaagatcctcacatttgagattgcatggtttgaccatgaa
gagaactccactggtgccatatgctcgcagcttgctaaggacgccaacgcagtcaggtca
cttgtgggagaccggatggctctagcgatccaggttgtttcttccgtgcttgtttcctgg
actatgggtttggttatcgcttggcgcttggccgtcgtaatgatagcagcgcaaccacta
atcattattggcttctacgctcgccgtgccctactgaagaacatgtccaagagatcgata
agagcacagtccgagggcagcaagctagcagcggaggccatctccaacttccggaccgtc
actgccttctcatcccaggatcacatcctacacctctttgaggagacgcaagatgggccg
cgcaaggaaaacattcgacaatcatggttcgctggccttgtccttggcacctccctgttc
atcataacatgctcatttgccctcgatttttggtatggcagcaagctgatggttgagcgc
cgcattactgccaagcaactcttgcagaccttcattatcatagtgatgacagggcgtctg
attggagaggcaggtagcatggcaacagaccttgctaagggcgctgatgcagttgcctat
gtgtttgctgttcttgatcggaaaacagaaattgactctgacaatcctgagggatacatc
ccgagtaagcttaaaggtgaggtggaaatgttggatgttgactttgcatacccatccagg
ccagatgtgatcatcttcaaaggattctccttgagcatacaaccaggcaagtcaacagcg
ctcgttggaaagagtggctccggtaagtcaaccatcattgggcttatcgagagattctac
gacccaactgcgggggtggtgaagattgacagtagagacataagatcttacaatctccga
gccttacgtcaacatattgggttggttagccaggagccagcactgtttgcaggtacgatc
aaggagaacatcatatacggcacagcaactgcaagcgaggcagagattgagagtgcagca
aaatctgccaatgcacatgacttcatcagcagcctcaaggacgggtacaacacatcctgt
ggtgagcgagggtttcagctatcgggagggcagaagcagcgcgtagcgatcgctcgcgcc
atcctcaagaacccagccatcttgttgctggacgaggccacgagcgcgctggacagcgca
tccgagaaggtggtgcagaaggcactggaccgggtgatggttggaaggacaagtgtagtg
gtggcacataggctcagcactgtccaaaactgtgacaagatcgccgtgctagagggagga
agagttgtggaggatggcacgcacgcatccctaatgggcaagggtcgttctgggatgtac
tttgggctggtcagtttgcagcagggtgcaaccggcactgagatattcgcttcacaagag
taa
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integrated database retrieval system
