Setaria viridis (green foxtail): 117834130
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Entry
117834130 CDS
T07951
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00061
Fatty acid biosynthesis
svs00071
Fatty acid degradation
svs01100
Metabolic pathways
svs01212
Fatty acid metabolism
svs04146
Peroxisome
Module
svs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117834130
00071 Fatty acid degradation
117834130
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117834130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svs01004
]
117834130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117834130
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117834130
Lipid biosynthesis proteins [BR:
svs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117834130
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of breast milk
117834130
Exosomal proteins of breast cancer cells
117834130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117834130
NCBI-ProteinID:
XP_034569642
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Position
8:30031286..30035975
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AA seq
661 aa
AA seq
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MAEMFTVKVEEAAPAAGGRPSAGPVYRSIYARDGLMELPQDIQSPWDFFSGAVKKYPKNR
MLGRRQVTGGKAGEYVWQTYEEVHQKVMRIGSAIRSFGVKPGSHCGIYGSNCPEWVMAMQ
ACNSQGICYVPLYDTLGANAVEFIMDHAEISIAFVQESKIKSIVMVVPKCTAHLKAIVSF
GDFTSEMKREAEDLGVSCFSWEEFSSMGKQNYELPEKRKDDICTIMYTSGTTGDPKGVII
TNRAIIAGVMTTEHLLKETDKVITEEDSYFSYLPLAHIFDQVIENYCISKGASIGFWQGD
IRYLMEDVHVMKPTIFCGVPRVYDRIYTGINQKIQSGGMIAKHLFQYAYNYKLANMKKGM
KQHEASPFFDKIVFNKIKEGLGGRIRLMIAGAAPLPGQIEEFMRVTSCSVFVQGYGLTES
CAGCFTSIANVFSMIGTVGPPVTTIEARLESVPEMGYDALSDTPRGEICLRGHTLFSGYY
KRPSLTEEVFSDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEVVESAYMQSP
LVASVWVYGNSFESFLVAVVIPERQALDEWAAANNKTSDFAELCNDPKAKGYIQDELNKT
GKKLGLRGFEMLKAIHLEPVPFSIEKDLITPTFKLKRPQLLKYYKDRIDQMYNDAKEGRT
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatgttcaccgtgaaggtggaggaggcagcgccggccgccggcggcaggccg
tcggccgggccagtctaccggagcatctacgccagggacggcctcatggagctcccgcag
gacatccagtccccttgggacttcttcagtggggcagtcaagaagtaccccaagaatagg
atgctcggccggcgtcaagttacaggtggcaaggccggtgaatatgtgtggcaaacgtat
gaggaagtgcaccagaaggtcatgaggatcggatcagccatcagaagcttcggagttaag
ccggggtctcactgtggcatatatggatccaactgtccagaatgggttatggccatgcag
gcatgcaacagtcaaggaatatgttatgtgccactgtatgacaccctcggagcaaatgct
gttgaattcatcatggaccatgctgagatatccattgcctttgtccaggagagcaagatc
aaatcaatagtaatggtagtccctaagtgcacagcccacctcaaagccattgttagtttt
ggagattttacaagtgagatgaaaagggaagctgaggatttgggtgtatcttgcttttct
tgggaagaattttcttcaatgggtaaacaaaactatgagcttcccgagaaacgaaaagat
gatatttgtacgatcatgtataccagtggaacaactggagatcccaaaggtgtgataatc
acaaacagagctatcattgctggtgttatgactacagaacaccttctcaaagagacagat
aaagtgatcactgaagaagattcatatttttcctaccttccattagcacatatatttgat
caagtaattgagaactactgtatctctaaaggcgcctccatcggattctggcaaggggac
attaggtatctgatggaggatgtacacgtgatgaagccgacaatattttgtggtgttcct
cgtgtctatgatcgtatatacacaggtataaaccagaaaattcagtctggagggatgata
gccaaacacctttttcagtatgcctacaactacaaacttgccaacatgaagaaagggatg
aagcagcatgaagcatcaccatttttcgacaagatagttttcaacaaaataaaggaaggg
cttggaggacgtatacgtctcatgatagcaggagcagcacctttgccagggcaaattgaa
gagttcatgcgggtaactagctgcagcgtctttgtacaaggatatgggctcactgagagt
tgtgccggatgcttcacatcaatcgccaatgttttctcaatgattggaacagttggtcct
cctgtcacgacgatcgaagcacgactggagtccgtccctgaaatgggttatgatgctctg
tcagacacgccccggggtgagatctgcttgaggggtcataccttgttctccgggtactac
aagcgccctagcctcactgaagaagtgttttcagatggctggttccatacaggtgatatt
ggagagtggcaaccgaatggcgcgatgaagatcattgataggaagaagaacatcttcaag
ttgtcccagggagagtatgtagcagttgaggtcgtggaaagtgcatacatgcagtcccct
cttgtggcatcggtttgggtctatgggaacagctttgagtcattccttgttgccgttgtc
atccctgagaggcaagctctcgacgaatgggcagcagccaacaacaagactagtgacttt
gcagagctgtgtaatgatccaaaagcaaaggggtacattcaggatgagctcaacaaaact
ggcaagaaactcgggttgagaggctttgagatgctgaaggcaattcacctggaaccagtg
cctttcagcatagagaaggatctgataactccaacttttaagctcaagagaccccagcta
ctcaaatattacaaggatcgtatcgatcagatgtacaatgatgctaaggaggggcgaact
gtgtga
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