Setaria viridis (green foxtail): 117834191
Help
Entry
117834191 CDS
T07951
Name
(RefSeq) cycloartenol-C-24-methyltransferase 1 isoform X1
KO
K00559
sterol 24-C-methyltransferase [EC:
2.1.1.41
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00100
Steroid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
117834191
Enzymes [BR:
svs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.41 sterol 24-C-methyltransferase
117834191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_31
Methyltransf_25
Sterol_MT_C
Methyltransf_23
Ubie_methyltran
CMAS
Methyltransf_12
MetW
PCMT
Methyltransf_29
MTS
Methyltransf_32
Methyltransf_2
FtsJ
Methyltransf_8
Motif
Other DBs
NCBI-GeneID:
117834191
NCBI-ProteinID:
XP_034569706
LinkDB
All DBs
Position
8:3306480..3312825
Genome browser
AA seq
348 aa
AA seq
DB search
MSQSWALHLSSGLQGKNIAKDQFGSTVEQYAKYHDLHGGDEQFRKSNYSDLVNKYYDLVT
GFAEYRWGQSLHFAPRWHGETRLESIKRFEHFIALQLGLKKGMKVLDVGCGIGGPLREIA
RFSSTQITGLNNNAYQISRGKEIISSAGLTEQCNFIKGDFMNMPFPDNTFDAAYAIEATI
HAPDALGAYKEIYRVLKPGQYFALDELCLTDRFDPNNAKHRNIKSQIEIGSGLPDIRSTR
QCIQAMKDAGFEVVIAKDLAEDSECPWYQEIDPGVFSWTSFSNSCVGRFLTYAIVGTLEF
LRIAPKGLNRLFSIMQTASHGLVTGSREQIFTATFFVLGRKPLEETEI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtcttgggccttacatctttcttcgggcttgcaagggaaaaacattgccaag
gatcaatttggatcgactgttgaacaatatgcgaagtatcatgacctgcatggtggtgat
gaacaattcaggaagtcgaactatagtgacttggtaaacaagtactatgacctcgtgacc
ggcttcgctgaatatcgctggggtcaatcactgcatttcgccccaagatggcatggagaa
actcgtcttgaaagcatcaagcggtttgagcattttattgcccttcaattggggctcaag
aaggggatgaaggtcttggatgttggatgtggaattgggggacctttaagagaaatcgcc
agattcagctcaacacagataactggactgaacaataacgcttaccagatttcaaggggc
aaggagatcatttcgtcggcaggtttgactgagcagtgcaacttcataaagggagacttc
atgaacatgccttttcctgataacacctttgatgcagcctatgcgatagaggccacaatt
catgcacctgatgcactaggtgcctacaaggagatataccgagtgcttaaacctggccag
tattttgcactagatgaactgtgcttgacggatagatttgacccaaacaacgctaaacat
aggaatatcaagtctcaaattgaaatcggcagtggcctcccagacatcagaagcacacgc
cagtgcatccaagctatgaaagatgcagggttcgaggttgtgatcgcgaaggatcttgct
gaggattccgagtgcccatggtaccaggaaatagatcctggtgttttctcatggaccagc
ttcagcaactcatgtgtcggacggttcctcacttatgcaattgttggcacactggagttc
ctccgtattgcccccaaaggcttgaatagactgttcagcatcatgcagacagcctcccat
ggcctggtgactggcagccgggaacagatctttacggcgaccttctttgtcctgggccgg
aaacctctcgaggagactgaaatttaa
DBGET
integrated database retrieval system
