Setaria viridis (green foxtail): 117834374
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Entry
117834374 CDS
T07951
Name
(RefSeq) tryptophan decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00901
Indole alkaloid biosynthesis
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117834374
00360 Phenylalanine metabolism
117834374
00380 Tryptophan metabolism
117834374
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117834374
00950 Isoquinoline alkaloid biosynthesis
117834374
00965 Betalain biosynthesis
117834374
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117834374
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117834374
4.1.1.105 L-tryptophan decarboxylase
117834374
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117834374
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_1_2
SepSecS
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
117834374
NCBI-ProteinID:
XP_034569859
LinkDB
All DBs
Position
8:complement(36532197..36534139)
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AA seq
526 aa
AA seq
DB search
MGSLDSNPATFDAFAAEADGFQPLNADDVRSYLHKSVDFIYDYYKSVESLPVLPGVEPGY
LRRLLQCAPPSAAAPFDIAMKELREAVVPGMTHWASPNFFAFFPATNSAAAIAGELIASA
MNTVGFTWQANPAATEMEVLALDWLAQLLRLPASFLMHRTDAGEGRGTGGGVILGTTSEA
MLVTLVAARDAALRRMGSSGVAGITRLVVYAADQTHSTFFKACRLTGFDPANIRSIPTGA
DTDYGLDPTKLLEAMQADVDTGLVPTYVCATVGTTSTNAVDPVGAIADVAARFNAWVHVD
AAYAGSACICPEFRHHLDGVERVDSISMSPHKWLMTCLDCTCLWVRDAHRLTDSLETNPE
YLKNGASDSGAVTDLKDMQVGVGRRFRGLKLWMVMRTYGAARLQEHIRSDVAMAKMFEES
VRSDDRFEVVVPRNFALVCFRIKPHGGGMTTEEDADGANHELMERLNRTGKAYLAHTVVG
GKFVLRFAVGSSLQEERHVRSAWELIRKTTDEIMEGEKKCVHEDGC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccttgacagcaaccctgccacctttgacgcgttcgccgctgaggccgacggc
ttccagccgctcaacgccgacgacgtccgctcctacctgcacaagtccgtcgacttcatc
tacgactactacaagtccgtcgagtccctgcccgtgctccccggcgtcgagccggggtac
ctgcgccgcctgctgcagtgcgcgccacccagcgctgccgcgccgttcgacatcgctatg
aaggagctccgggaggccgtggtgccggggatgacccactgggccagccccaacttcttc
gccttcttcccggcgaccaacagcgccgcggccatcgccggggagctcatcgcctccgcg
atgaacaccgtcgggttcacgtggcaggccaacccggccgccacggagatggaggtgctc
gcgctcgactggctcgcgcagctcctgcgcctgccggcgagcttcctcatgcaccgcacc
gacgccggcgagggccgcggcaccggcggcggcgtcatcctcggcaccaccagcgaggca
atgctggtcacgctcgtcgccgcccgcgacgccgcgctgcgacgcatgggctccagcggc
gtcgccgggatcacgcggctggtcgtctacgccgccgaccagacccactccaccttcttc
aaggcgtgccgcctcaccggcttcgacccggccaacatcaggtccatccccaccggcgcc
gacacggactacggcctcgacccgacgaagctgcttgaggccatgcaggccgacgtcgac
accggcctcgtgccgacctacgtctgcgccacggtcggcaccacgtcgacgaacgccgtc
gacccggtgggcgccatcgctgacgtcgccgcccggttcaacgcgtgggtccacgtcgac
gccgcctacgccgggagcgcctgcatctgcccggagttccggcaccacctcgacggcgtg
gagcgcgtggactccatcagcatgagcccgcacaagtggctgatgacgtgcctcgactgc
acctgcctctgggtccgcgacgcgcaccgtctcaccgactccctggagaccaacccggag
tacctcaagaacggcgcgagcgactcgggggccgtcaccgacctcaaggacatgcaggtc
ggcgtcggccgccgcttccgcgggctcaagctctggatggtcatgcgcacctacggcgcc
gccaggctccaggagcacatccgcagcgacgtcgccatggccaagatgttcgaggaatcc
gtgcgcagcgacgaccggttcgaggtcgtcgtgccgaggaacttcgcgctggtgtgcttc
aggatcaagccccacggcggcggcatgacgacggaggaggacgccgacggggccaaccat
gagctcatggagcggctgaacaggaccgggaaggcgtacctggctcacacggtggtcggc
ggtaagttcgtgctgaggttcgcggtggggtcgtcgctgcaggaggagaggcacgtgcga
agcgcgtgggagctcatcaggaagaccaccgatgagatcatggagggagagaagaagtgc
gtgcatgaggatgggtgctga
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