Setaria viridis (green foxtail): 117834529
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Entry
117834529 CDS
T07951
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117834529
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117834529
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
ARM_TT21_N
ARM_TT21_2nd
Ribonuc_red_lgN
Leuk-A4-hydro_C
UTP6_C
Motif
Other DBs
NCBI-GeneID:
117834529
NCBI-ProteinID:
XP_034569979
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Position
1:35147153..35150062
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AA seq
793 aa
AA seq
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MASASPCACGAPSPSLRCPLALSLPFVSFPPAVRLATPPLLPRRLAVSRPRAASALEALV
LESDDEDGDDADEEAEVEEEAGAGLFQGVAWAAGADERDAVKSPELQVFELEELPEQWRR
SRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQ
HWYRFNFALATRVADCLAREGKVEKCREVFDAMVKQGRVPAESTFHILVVAYLSVPGGRC
LEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKHNLRQAEFIYHNIVTSNLAV
HKDVYVGLIWIHSYQDFIDRDRIKALRDEMKQAAFEETTDVLVSLMRAFSKEGDIKETEA
TWHRLLQSDCELPAQAYICRMELYARTGEPMKSLEMFKEMKGHNVPPNVASYHKIIEIMA
KARERETAEKLMDEFVESHMKHLMPAFLSLMYLYLDLDMHEKLEQTFTKCLGRCRPNRIL
YTIYLESLVRIGNVTKAEEIFGEMHKNGTIGTNAKSCNIMLRGYLSAEDYKKAEGIYDLM
CKKKYDVPVDSLEKLQSGLLISKKVVKPPKPVSMKLDEEQREILIGLLLGGTQIESHARK
GVHIVNFKFQEDSNAHSVLRAHIHERFIEWLPSACRSLNDDSEIPYQFSTIPHAHFGFFA
DQFFLKGQPVLPKLVHRWLSPRVLAYWFMFGGFRLKSGDIVLKVSGGNIDGVERIVNSLQ
TQSLTCKVKRKGRFFWIGFQGSNADSFWKIIEPHVLDSFTGSAMQESHRIGSDGSRDSDT
DYEDDTQRYDTET
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcctctccctgcgcctgcggcgctccatccccatcgctgcgatgccctctc
gccctgtcgctccccttcgtttcctttcctcccgccgtccggctcgccaccccgccgctt
ctcccgcgccgcctcgccgtgtcgcgtccaagggcggcgtcagcgctggaggccctcgtg
ctggagtctgacgacgaggatggagacgacgcggacgaggaagcggaggtggaggaggag
gccggggcgggcctgttccagggtgtggcgtgggcggcgggggccgacgagagggacgca
gtgaagtcccccgagctgcaggtgttcgagctggaggagctgccggagcagtggcggcgg
tcgaggatcgcctggctctgcaaggagctccccgcctacaagcactccaccttcacccgc
atcctcaacgcccagcgcaagtggatcacccaggacgacgccacctacgtcgccgtccac
tgcctccgcatccgcaacaacgacgccgcattccgggtgtacagctggatggtgcggcag
cactggtatcgcttcaactttgcgctagctacaagggtggccgattgtcttgccagggaa
ggcaaggttgagaagtgccgagaggtgttcgatgcaatggtgaagcaaggccgagtgcct
gccgagtccaccttccatatattggtcgttgcatatctcagcgtgccaggggggcgatgt
cttgaggaggcatgcaccatctacaaccagatgatacagatgggtggctacaagcctcgc
cttagcctacacaattcattgttccgtgcacttgtgagcaagacaggaggcactgcgaag
cacaatctcaggcaggctgagttcatctatcacaatatagtcacgagcaatcttgcagtg
cacaaggatgtttatgtggggctcatctggattcacagttaccaagatttcattgataga
gacagaatcaaagctcttagggatgagatgaagcaagctgcgtttgaagagactactgat
gtgctggtatcactgatgagggccttctccaaggaaggtgatattaaagaaacagaggca
acatggcataggcttcttcagagtgattgtgagctccctgctcaggcttatatctgccga
atggagctttatgcacggactggtgagcctatgaaatcccttgaaatgttcaaggaaatg
aagggtcataatgtacctcccaatgttgcatcatatcataagataattgagataatggca
aaagctagagagagagagaccgcagaaaaactaatggatgagtttgttgaaagccacatg
aaacatctgatgccagcctttcttagcttgatgtatttgtatctggatctggatatgcat
gagaaattggagcagacattcacaaaatgccttggtcggtgtcgtccaaatagaatattg
tacaccatttatctggaatcactggtgaggattggaaatgtcactaaggctgaggagatt
tttggtgaaatgcataaaaatgggacgataggtactaatgccaagtcttgcaacatcatg
cttagaggctatctttctgcagaggactataagaaagctgagggcatttatgatttaatg
tgtaaaaagaagtatgatgtaccagtggattctttggaaaaacttcaaagtggtctcctc
attagcaagaaagttgtcaagccaccaaaacctgtgagcatgaaattggatgaagaacag
cgtgagattttgatcggtttgctacttggaggcactcaaatagaatctcatgcacggaaa
ggagttcacatcgtcaactttaagttccaagaagattctaatgctcattcagttctaagg
gcacacattcatgaacgtttcattgaatggctgccttcagcatgcagatcattaaatgat
gacagtgagatcccttatcagttttcaaccataccccatgcacattttggtttctttgca
gatcagttctttctgaaaggccagccagttctcccaaagcttgtccatcgatggttatcc
ccacgtgttctggcatattggttcatgtttgggggcttcagactcaaatcaggtgatatt
gttcttaaggtcagtggcgggaacattgatggcgttgaaagaatcgtgaattccttgcaa
acgcagtctttaacatgcaaagtgaagaggaaagggagattcttttggataggtttccag
ggaagcaatgctgactcgttctggaaaataattgaacctcatgtattggacagttttact
ggttctgcgatgcaggaaagtcatagaatcggttcagatggctcgcgagatagtgatacc
gattatgaggatgatacacagaggtatgatacagaaacttaa
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