Setaria viridis (green foxtail): 117834630
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Entry
117834630 CDS
T07951
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 3
Organism
svs
Setaria viridis (green foxtail)
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRRNT_2
LRR_8
Motif
Other DBs
NCBI-GeneID:
117834630
NCBI-ProteinID:
XP_034570059
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Position
8:complement(37364002..37368085)
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AA seq
1112 aa
AA seq
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MATVSHRSNLPHRPSSPPPMGPPLRLRLLPSNGRLTAALLLLAACLSACSVQAVTSAEAS
YIAHRQLVAMKEAGGGESGDLPPDFEFDDRVGANFPNPRLRRAYIALQAWRRAFYSDPKG
YTSNWVGNDVCSYNGVICTEALDDPKLTVVAGIDLNGADIAGYLPPELGLLTDLAFFHIN
TNRFCGIIPKSMSRLSILHEFDASNNRFVGPFPFVCLEMASLKYLDIRFNEFEGELPPGL
FDKDLDAIFVNTNRFVGHIPENLGNSTASVVVVANNGLTGCIPKSIGRMARTLDEINFLN
NRLDGCLPLEMGMLQNTTVIDVSGNVLVGTLPEQLSNVTKLEQFDCSRNVFTGIVHEAIC
ELPALQNFSFASNFFNSEAAPCMPSEKARVSLDDRDNCLGALRPAQKTTLQCAPVLARPV
DCSKNVCAGYPGKPAGPPSLPGKPPMVKVPPTPTPTPTPTPTTPAPHQPGPPVKSPNTPL
PQGPSPSPAPAAPAVPVKSPPAPQQAAPPPPNSAWLPVTPERPKASPPQAQPPAPAKSTP
PSTPGSSPPAKSTPPPAPVSYPPATPAKSTPPPAPVSSPPATPAKSTPPPAPPVASPPPP
VKSPPPPAPVASPPPPVKSPPPPAPVASPPPPVKSPPPPAPVSSPTPPEKSPPAPAPVKS
PPGPPFKSPETPSDHSAPPESTPSEPPSTPEKPQPPPSPVEAVTPPSESYTPEEPASSPP
QPPTSSTPPTPVTSSPPPVVKSSPPPAPEVVKSSPPPAPVSSPPTTPKASAPPAPVSSPP
PQEKTSPPAPATSPPHPPVSSPPPVVKSSPPPAPVSSPPPAPKASPPPAPVSSPPPVVKS
SPPPAPVSSPPPPAPKASPPPAPVSSPPPVVKSSPPPAPVSSPPPAPKASPPPTPVSTPP
PEVKSSPPPAPVSSPPPAPKASPPPAPVSSPPPVVKSSPPPAPVSSPPPAPKASPPPAPV
SSPPPPVKSPPPPAPVSSPPPPVMSPPPPAPVSSPPPPVKSPPPPAPVSSPPPPVKSPPP
PAPVSSPPPPEKSPPPPAPVSSPPPVKPSSPPPAPVSSPPPVVASPPPKQEEVTSSPPPA
EFLPPPSFNDVILPPIMANKYASPPPPQFQGY
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgtcccatcgctcaaacctccctcaccgcccctcctccccccctcccatg
ggccctcctctccggctccgcctcctccccagcaatggccgcctcacggcggctttgctc
ctcctggccgcttgcctgtccgcctgcagcgtgcaggcggtgacaagcgcggaggcctcc
tacatcgcgcaccgccagctcgtggccatgaaggaggccggcggcggcgagtccggcgac
ctcccgccggacttcgagttcgacgaccgcgtcggcgccaacttccccaacccgcgcctc
cgccgcgcctacatcgcgctccaggcctggcgccgcgccttctactccgaccccaagggc
tacacctccaactgggtcggcaacgacgtgtgctcctacaacggcgtcatctgcaccgag
gccctcgacgaccccaagctcaccgtcgtcgccggcatcgacctcaacggcgccgacatc
gccggctacctgccgcccgagctcggcctcctcaccgacctcgccttcttccacatcaac
accaaccgcttctgcggcatcatccccaagagcatgtcccgcctctccatcctccacgag
ttcgacgccagcaacaaccgcttcgtggggcccttccccttcgtctgcctcgagatggcc
tcgctcaagtacctcgacatcaggttcaacgaattcgagggcgagctcccgccggggctc
ttcgacaaggacctcgacgccatcttcgtcaacaccaaccgcttcgtcggacacatcccg
gagaacctcggcaactcgacggcgtcggtggtcgtcgtcgccaacaacgggctgaccggg
tgcatccccaagagcatcgggaggatggcgaggacgctggacgagatcaacttcctcaac
aacaggctcgacggctgcctgccgctggagatggggatgctgcagaacaccaccgtcatc
gacgtcagcggcaacgtcctcgtcgggaccctgccggagcagctctccaacgtcaccaag
ctcgagcagttcgactgctccaggaacgtcttcaccggcattgtgcacgaggccatctgc
gagctcccggcgcttcagaacttcagcttcgcctccaacttcttcaactcggaggcggcg
ccgtgcatgccgtcggagaaggcgagggtcagccttgacgacagggacaactgcctcggc
gcgctccgcccggcacagaagaccacgctgcagtgcgcgccagtgctcgcgaggcccgtc
gactgcagcaagaacgtctgcgccggatacccggggaagccggcgggtccgccatcgctg
ccggggaagccacccatggtcaaggtgcctccgacgcccacgccgacgcccacgcctacg
cccacgacgccggcgcctcaccagccgggtccgcccgtaaaatcaccgaacacaccatta
ccacagggtccatcgccaagcccggccccggccgcgcctgccgtacccgtcaagtcgccg
ccggcaccgcagcaagctgctccgccgccgcccaactccgcctggctcccggtgacaccc
gagcgccccaaggcgtcgccaccacaggcacagcctccggcgccagccaagtctactccg
ccgtcgactccaggaagctcacccccggcgaaatccaccccgcctcctgcaccagtaagc
tatcccccagcgacgccggcgaaatccaccccgcctcctgctccagtaagctcgcccccg
gcgacgccggcgaaatccactccgcctccggcaccaccggtggcctcaccaccaccgccc
gtcaaatcgcctcctccgcccgcgccggtggcttcgccgccaccgcccgtaaaatcgcct
cctccaccggcaccagtggcctctccacctcccccggtgaagtctccgccaccacccgct
ccggtgagctcgcctactcctccggagaaatctccaccagctccagctccagtgaaatct
ccaccgggacctccatttaagtctccggaaacgccttctgatcactctgcgccacctgaa
tcaactccaagcgaaccaccttcaactccggagaagccacaaccaccgccatctccggta
gaggcggtaactccaccatccgagtcttacacaccggaagaaccagctagctcaccacct
cagccgccgacgtcgtcgacaccaccgacaccggtgacctcatcacctcctccagtggtg
aagtcttcaccaccaccagctccagaggtagtgaagtcttcaccgccacccgcaccggtc
agttcaccgccgactacgcctaaggcatcggctccaccggctccggtgagctcgccacct
cctcaagagaagacttcaccacctgcgccggccacatcacctccgcatcctcctgtgagc
tcaccgcctcctgtggtgaagtcttcgccaccacctgcgcccgtcagctcgccaccgcct
gcgcctaaggcatcacctccacccgctcctgtgagctcaccacctcctgtagtgaaatct
tcgccaccacctgcgccggtcagctcaccgccgccacctgcgcctaaggcatcgcctcca
cctgctcctgtgagctctccacctcctgtggtgaagtcctcgccaccgccagcaccagtc
agctcgccacctcctgcgcctaaggcatcacctccaccaactccggtgagcacaccgcct
cctgaggtgaagtcctcgccgccacctgcgccggtcagctcaccaccacctgcaccaaag
gcatcacccccacctgctcctgtgagctcaccgcctcctgtggtgaagtcctccccaccg
cctgcaccggtcagctcaccaccgcctgcgcctaaggcatcgcctccacctgctcctgtg
agctcaccaccacctccggtcaagtcaccacctccacctgccccagtgagctcacctcct
cccccagtgatgtctccaccgccaccggcaccagtgagctcaccaccaccaccagtaaag
tcgccgccacctccagcaccagtgagctcaccaccacctccagtgaagtctcctcctcca
ccggcaccggttagctctccaccacctccggagaaatctcctcctccaccggcaccggtt
agctctccaccaccagtgaagccatcgtcgccgccaccagctccagtaagctcaccacct
ccagtggtcgcctcacccccgccgaagcaagaagaggtaacatcatcaccaccaccggcg
gaattcctacctccgccgtcattcaacgacgtcatcctcccacccatcatggccaacaag
tacgcatcaccaccgccccctcagttccaagggtattaa
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