Setaria viridis (green foxtail): 117834721
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Entry
117834721 CDS
T07951
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03010
Ribosome
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117834721
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117834721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
svs03011
]
117834721
04121 Ubiquitin system [BR:
svs04121
]
117834721
Ribosome [BR:
svs03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117834721
Archaea
117834721
Ubiquitin system [BR:
svs04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117834721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Ubiquitin_5
TBK1_ULD
DUF2604
Motif
Other DBs
NCBI-GeneID:
117834721
NCBI-ProteinID:
XP_034570138
LinkDB
All DBs
Position
8:12756555..12757930
Genome browser
AA seq
130 aa
AA seq
DB search
MQIFVKTLTGMSITLEVESSYTTDNVKAKMQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQESTLHLVLRLRGGGGGRGCYPYSIDLNLRNLALEHNEKKLICRKATNCRKKECGHSNQ
LRPKKKLSRW
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgcagatatttgtgaagacactgacggggatgagcatcaccttggaggtcgagagcagc
tacaccaccgataatgtaaaagccaagatgcaggacaaagaaggtatcccgccggaccag
cagcgcctcatctttgcagggaagcagctggaggatggccgcaccctggctgactacaac
attcaggagtccacgctacacctagttctgcgcctgcgtggcggcggtggtgggagaggc
tgctacccctatagcatcgaccttaatcttcggaacctcgctctggagcacaatgagaaa
aagttgatctgccgcaaagctacaaactgccgaaaaaaggagtgtggccacagcaatcag
ctgaggcccaagaaaaagctctcccggtggtga
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