Setaria viridis (green foxtail): 117834787
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Entry
117834787 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117834787
Enzymes [BR:
svs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
117834787
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117834787
Prokaryotic type
117834787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
117834787
NCBI-ProteinID:
XP_034570216
LinkDB
All DBs
Position
1:33455949..33458182
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AA seq
538 aa
AA seq
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MAAASPPRSPPAAKRPKMSSSSDPEADAESTSPSAAGEPRRPRYKRRKVAILLGYCGAGY
QGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVVSGRF
YVDPPGFIDRLNAQLAPQIHAYGYVRVTNSFSAKKFCDRRRYLYLLPVFALDPSAHPDRE
AVMASMGSGSELTKCLECSERGRKVPGVLGREGKLPSPGVNGTDAPVEGTVNTHDESGSI
GAAKGDPTVSEETQAGNAELGSNGASDVVPSGSADADASIGNEENKLEATATEEKVQGMD
FENSNGEEKPPTKSDFSYNDEVKERFNRILKYYVGTHNFHNFTTRTKAEDPAAKRFIISF
AADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVKLNV
PTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYCEEAEEFKVKYIFPHIAAMEHKEGAV
ALWLHSLNHRNYPDFRYMETAGADAKVGAEVAAGAEVNVGAENDGIEEVQMPSDNVSE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccgccgcgctccccacccgccgccaagcgccccaagatgtcctcc
tcctccgacccggaggctgatgccgagtccacctcgccctccgccgccggggagccccgc
cgccccaggtacaagcgccgcaaggtcgccatcctcctcggctactgcggcgcggggtac
cagggcatgcagaagaacccgggcgcgcgcaccatcgagggcgacctcgaggaggcgctc
taccaggcgggtgccgtgccggaggccgaccgcgccgcgccgcggcggtacgattgggcg
cgcgccgcgcgcaccgacaagggcgtcagcgccgcggcgcaggtggtgtccggccgattc
tacgtcgacccgccaggcttcatcgaccgcctcaacgcccagctcgcgccgcagatccac
gcctacggctacgtgcgcgtcaccaactccttcagcgcgaagaagttttgcgaccgccgg
aggtacctttacctgctccccgtgttcgcgcttgaccccagcgcgcacccggaccgcgag
gccgtcatggcgagcatgggaagtggaagcgagctgaccaagtgcctggagtgctccgag
agggggaggaaggtgcctggtgtcttgggccgggaggggaagctgcccagccctggggtg
aatggtactgatgctcccgtggagggaactgtgaacactcatgacgaatcgggatctatt
ggggctgcgaaaggtgatccaacagtttcagaagaaactcaagctggaaatgctgagctg
ggatcaaatggtgctagtgatgttgtaccttcaggttcagctgatgcagatgcttcaatc
ggcaatgaggagaataaacttgaggccacagctactgaagagaaagtacaaggtatggat
ttcgagaatagcaatggagaagagaagccaccaaccaagagtgacttttcttacaatgat
gaggtgaaggagaggttcaacaggattctcaagtactatgttggaacccataatttccac
aacttcaccacaagaactaaggcagaggatcctgcagccaaaaggtttattatttccttt
gctgccgatcgtgttgttagcctggatgggattgattttgtcaggtgtgaagttgttggc
cagagtttcatgctccatcagatccggaagatgattggccttgctgtagctgtgatgaga
aactgtgcacctgaatcgatttatgatgttgccttccgcaaggatgtcaaacttaacgtg
cctacagcacctgaggttgggttgtacctagatgaatgcatgttcacctcatacaacaag
aaatggaaggattcgcatgaggcagtttccatggaaccttattgtgaggaggctgaagag
ttcaaggtcaagtatattttccctcatattgcggcgatggaacacaaggagggagctgta
gctttgtggttgcactcattaaatcacaggaattatccagatttccgctacatggaaact
gctggtgctgatgccaaggttggggctgaagttgctgctggtgcagaggtcaacgttggg
gctgaaaatgatggtatcgaagaagtacaaatgccaagtgataatgtgagtgagtaa
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