Setaria viridis (green foxtail): 117835058
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Entry
117835058 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117835058
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117835058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
117835058
NCBI-ProteinID:
XP_034570299
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Position
9:5651524..5654858
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AA seq
433 aa
AA seq
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MEDRAVEEAEVSGAAEFAPALIAAHPHGNSVAVAIGPELRVFDLKVGSPVLLSDDCGGRS
HSDAIRAICFSVSGALFASAGDDKLVKVWKTDSWRCIRTITSEKRVSAVAISNDDLYVTF
ADKFGVVWLVTLGEDGTEQVSVDNKPVSILGHYCSIITSMKFSPDGRFIATADRDSKIRV
ALFPKNPLKGAREIQSFCLGHTDFVSCIAFTNISENQSFLISGGGDSTVRLWDHINGCLL
DTCQVRDKMEELLELNETDDSSLAIADIRPSNDGSLVAVAIQSFNGVMLLACDLVGKKLS
FLKVITMEKSYIPTSLASSFSSELLWTVMGASNMPNQASSQLLTRLRIIRRFQKDLLSSD
NCPAILEDSEVPHGEKLLLALQGSLDVAKQEEVLASVLAALKVSMHKMLVKKHYSEERRE
QRKRGRNDKKIKS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagagctgtcgaggaggccgaggtgagcggcgcggcggagttcgcgccagcg
ctcatcgccgcccacccgcacggaaactctgttgccgtcgccatcggccctgagctccgc
gtgttcgatctcaaggttggttctccagttttattgtcagatgattgtggcggccgttct
cattcagatgctataagagctatttgctttagtgtgagtggtgctttatttgcatccgct
ggtgacgacaaacttgtgaaggtttggaaaactgattcgtggcgttgcatccggactata
acttcagagaagagggtcagtgcagttgctattagcaacgatgacctgtatgtaactttt
gcagataagtttggtgttgtttggttagtcactctgggggaagatggtacagaacaagtt
tcagttgataacaaacctgtgtcaattcttggtcactactgtagtatcatcactagtatg
aagttttcaccagatgggcggttcattgctactgctgatagggactccaaaatacgagta
gcgttattcccaaagaatcctcttaaaggggcccgcgaaatacaaagcttttgccttgga
catacagactttgtgtcatgcatcgccttcacaaacatttctgaaaatcagagctttctt
atatcaggaggaggtgattcaactgttcgcttgtgggaccacataaatggatgtctcctt
gatacatgccaagtcagagacaagatggaagagctcttggaattgaatgaaacagatgat
agcagtctagccattgcagatatacgtccgagtaatgatggctcattggttgctgtagct
attcaaagtttcaatggcgtaatgcttttagcatgtgatttagtaggaaagaagttatct
ttcctaaaggtgattacaatggaaaagagctatattcctactagcttagcatccagcttc
tcatcagaactcctatggactgtcatgggtgcatcaaacatgcccaaccaggcttcctcc
cagttattaactcgtttaaggatcattcgtcgcttccaaaaggatctgctatcttccgat
aactgtcctgcaatccttgaagacagtgaggtaccacacggtgagaagctccttttggcg
ctgcaaggaagcctcgacgttgcaaagcaagaggaggtgttagcctcagtgctggccgcg
ctgaaggtttcgatgcacaagatgctggtgaagaagcactactcggaagagaggagggag
cagcggaaacggggcaggaacgacaagaagatcaagagctag
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