Setaria viridis (green foxtail): 117835136
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Entry
117835136 CDS
T07951
Name
(RefSeq) protein RIK isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117835136
Spliceosome [BR:
svs03041
]
Complex B
Other components
Prp19-related factors
117835136
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GFIT
Motif
Pfam:
KH_12
KH-I_KHDC4-BBP
KH_1
Motif
Other DBs
NCBI-GeneID:
117835136
NCBI-ProteinID:
XP_034570399
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Position
9:complement(50615962..50622152)
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AA seq
658 aa
AA seq
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MTEDRAHKATDEPAAAGRQRPERKKRKWDQPAEDLVSAAVKAAAVSGMPVINIGALPGVA
LPGVTAYGAATLPSVVPVPYSLPPHIAPLVLQNASAALQKLSQAKIPDEVIAREVVINDA
EPSVRYKLTKRQTQEEIQRCTSTVIITRGKYHPPNGQPDGEKPLYLHISAGSQLKDTAER
IKAVDRAASMIEEILKQGTISESTLVSYSSSSGQAVYPFSASIFLGFDADPSLNIAARIR
GPNDQYINHIMKETGATVVIRGKNSENLGGCLGEASQQPLHLYLTSMHLKSLEAAKVLAE
NLLDTIAAEFGASRISSSKVYGAVPPPQQLLAGVDTSGARSDVHSTLSPNVLAGPSHSFA
STGVIAPIVAPEVTLQSVAPTYSGVPPPSNMTCPIPSVNGGTFYSGYGDIYPQATPLQQV
AFTLKHASSSTTQAVPVTSTSTSTVIKANSSSDVEADKRSRRKFQELPVSKGPTTENQNS
QLGSKFIKTGLDSLCDITGSSIAPPKKVQPGPNGMLPPDQGDMPSHLSISYKIPPPPPKS
MLLPPTKNMPPPSPRSMPPPPPKFPSNEMLSRNKSKTFASKELMEPPKDTRSVSPSQLPP
KEPKEEKPKGGPLSDTLLKLMDYGDDNDDDDDDDIDVIDSVPKGNPTPCSEQKPFWAA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaccgggcccacaaggccaccgacgagcccgccgccgcgggcaggcaaagg
cctgaaaggaagaagaggaagtgggatcagcccgcggaggacttggtctccgcggcggtg
aaggctgctgccgtgtcggggatgcccgtgattaacatcggcgctcttcctggcgttgca
ctgcctggcgtcaccgcctatggagctgctacattgcctagtgtagtccctgttccttat
tcgttgccgccgcatattgcaccattggtgctccagaatgcttctgctgcacttcagaaa
ttgagtcaggcaaaaataccagatgaggtcatagcgcgggaagttgttataaacgacgct
gaaccatctgtgcgatataagcttacaaaacgacaaacacaagaagagattcagagatgc
acaagcactgtcatcattaccaggggaaaatatcaccctccaaatggacagcctgatggt
gagaaaccgctctatctacatatctctgctggatctcagttgaaagataccgctgagcgt
atcaaggcagttgaccgtgcggcttcaatgattgaagaaatattgaaacaaggcacaatc
tcagagtctacattggtctcttattcttctagcagtggacaggctgtttatccttttagt
gcctcgatatttttgggttttgatgcagatccatcattaaacatcgcagctcgaattcgt
gggccaaatgatcagtacataaatcacatcatgaaagaaacaggggcaaccgttgtaata
agaggaaaaaattcagagaatcttggcggttgtcttggtgaagcttcacagcaacctcta
cacctatacctcacaagtatgcatttaaagagcctagaagctgcaaaagttttggcagag
aacctcctggatacaatagcagcagaattcggtgcttccagaatttcttcttcaaaagta
tatggtgctgttccacctcctcagcagttgttagctggtgtagatacctcaggagcaaga
tcggatgtccattctactttaagtcctaatgtgttagcaggaccgtcacattcctttgca
tctactggagttattgctcccattgttgctcctgaagtgacactgcaatctgtggctcca
acatattctggggttccaccacccagtaatatgacctgtcctattccatcagtaaatggt
gggacattttacagtggctatggagatatttatccccaagcaactccattgcagcaagtg
gcattcacactcaagcatgcctcatcgtcgacaactcaggctgttccagtgacatccaca
tcaacaagcacggtgataaaagcgaactcaagctcggatgtggaagcggataaacgttcc
agaaggaaattccaggaactaccagtttccaagggtccgactacagaaaatcagaactca
caactggggtccaaatttattaagacaggtctagatagtttatgtgacattactggttca
tcaattgcacctccaaagaaagttcagcctggaccaaatggaatgcttccaccagaccaa
ggggatatgccctcacatctctctatatcgtataagataccaccaccacccccgaagagc
atgctgctgcctccaaccaaaaacatgccacctccatcacccaggagcatgcctccacct
ccacccaaatttccttcaaatgagatgttgtcaagaaataagagcaagacttttgcatcg
aaggagctgatggaacctccaaaggatacaagatcagtctcgccatctcaactaccacca
aaggagcctaaggaggaaaaaccaaaaggcggacccttatctgatactttgctgaagctt
atggattacggagatgataacgacgacgacgacgacgacgatattgatgtcatagacagc
gtacctaagggcaatccaactccttgttcagagcagaaaccattttgggcggcttaa
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