Setaria viridis (green foxtail): 117835308
Help
Entry
117835308 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20168
TBC1 domain family member 15
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117835308
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117835308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
117835308
NCBI-ProteinID:
XP_034570561
LinkDB
All DBs
Position
1:complement(35543879..35551916)
Genome browser
AA seq
672 aa
AA seq
DB search
MRGGDAGAAAAEAGSPRSPDLYDFSDDSDYAAASHHTAMRTDSVDRGSDETARIDVVYEK
ERVTIHLTQYGSGRISGKLRLFLQRGSLFLSWEPNEGADSLSTSSIGVEIEKYRNLYTIK
ALPLSDVRFIRRHTPTFRLDYIIIVLSSGLAYPPFYFYNGGIRELFATLKQHVFIIRSDD
DPNVFLVNDFQDPLQKSLSSLELPGVASVANAMSRQNSLSFTGANDESRHGTDGRHGEAS
SISQYGSKQKNKSNDPGRDLSIQVLEKFSLVTKFARDTTSSLFQNNSGAHAYGRQQHEYL
LDNEASDKQKNQYITPEKASMPSAPPEPDPLPLVWGKQRDRPLSAEEWAAFLDPEGRVMD
SKALRKKVFYGGVDHVLREKVWKFLLGYHEYDSTYAEREYHAAMKRAEYEAIKSQWKSIT
ATQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNRNVVVLRDILLTYSFYNFDLGYCQ
GMSDFLAPILYVMEDESESFWCFASLMERLGANFNRDQNGMHAQLLALSKLVELLDPPLH
NYFRQNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYLSEHFHLYLCVAILKRYR
QRIIGEQMDFDTLLKFINELSGQINLDRALQDAEALCTIAGENGASCIPPGTPPSMPIET
DGGLYVQQDDVL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggggagacgcgggagcagcagcagcggaggcagggtcgccccgctcgccggac
ctctacgacttctccgacgactccgactacgccgccgcctcccatcacacggcgatgcgg
acggattcggtggacagaggctcggatgagacggcgaggattgatgtggtttatgagaag
gagcgtgtgacaatccacctgacgcagtatggctccggccggatcagtgggaagctgcgc
ctgtttctgcagcggggatcattattcctgagctgggagccaaatgaaggagccgactct
ttgtcaaccagttcaatcggcgtggaaatagaaaaatatagaaacctgtacactatcaag
gccttgcccttaagtgatgtacgcttcatccgtaggcataccccaacatttcgattggac
tacataataattgttctatcatcaggcctggcttatcctccgttctatttctataatggt
ggaattcgtgaattgtttgcaacattgaaacagcatgtcttcattatcaggtcggatgat
gatcctaatgtgtttcttgtcaacgactttcaagatcctcttcagaaaagcttgtcatcc
ctggagcttccaggagtagcctctgtggcaaatgccatgtcaaggcaaaattcactcagt
ttcactggggcaaatgatgagtccaggcatgggactgatggaagacatggggaagcttct
agcatttctcagtatggctcaaagcaaaagaacaaatcaaacgacccaggtcgtgatctt
tcaattcaagtcttggagaaattctcattggttacaaagtttgcacgtgatactacatca
agcctctttcaaaacaatagtggtgcccatgcttatggacgccaacaacatgaatatctt
ctggataatgaagcaagtgataagcaaaaaaatcagtatataacaccagaaaaggcttcc
atgccctcagctccaccggagccagatccattacctctagtatggggaaaacaaagagat
cgtccattaagtgccgaagagtgggcagctttcttagatcccgaaggtagagttatggac
tcgaaggcgctgaggaaaaaagttttctatgggggagtcgatcatgttttgagagaaaag
gtatggaaattcttgttggggtatcatgaatatgattcaacatatgctgagagggaatac
catgctgccatgaaacgagcagaatatgaagccataaaatctcagtggaagagtatcaca
gccacccaagctaaaagattcaccaagtttagggaaagaaaaggccttattgacaaagat
gtggtgagaacagataggtctgttccctattatgaaggagatgacaatcggaatgttgta
gttctacgtgatattctgttaacatattcattctacaatttcgaccttggttactgccaa
ggaatgagtgactttttggctcccattctttatgtcatggaggatgagtctgaatcattt
tggtgctttgcttccttgatggaacgactaggagccaattttaatcgtgaccagaatggc
atgcatgctcaactacttgcattatccaagcttgtggagctgcttgatcctccattgcat
aactattttaggcagaatgactgcttgaactatttcttctgtttccgctgggttctcata
cagttcaaaagggagttcagtttcgaccagatcatgctcttgtgggaagttttgtggacc
cattatttgtcagaacatttccacttgtacttgtgtgtagcaatcttgaaaagataccgt
cagcgtataattggggagcagatggactttgataccctcctcaagttcatcaatgagctc
agtggtcagatcaatcttgaccgggctctccaggatgctgaggcattgtgtactattgca
ggagaaaatggggcatcttgcattccacctggaaccccaccttcaatgcccatcgagacc
gatggtggcctgtatgtgcaacaagatgatgtcttgtga
DBGET
integrated database retrieval system
