Setaria viridis (green foxtail): 117835859
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Entry
117835859 CDS
T07951
Name
(RefSeq) fimbrin-4
KO
K17275
plastin-1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svs04812
]
117835859
04147 Exosome [BR:
svs04147
]
117835859
Cytoskeleton proteins [BR:
svs04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117835859
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of microglial cells
117835859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
CH_2
CAMSAP_CH
HOOK_N_NuMA
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
117835859
NCBI-ProteinID:
XP_034571066
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Position
1:35898659..35903504
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AA seq
707 aa
AA seq
DB search
MSAGFVGVVVSDPSLQGQFTQVELRSLKAKFVSLKRDSGHVTTKNLPGLMKKLRGLNEVV
SEEEIAAFLSESYPDSDQEIEFESFLREYLNLQARVSAKVGGGAGGGGGKTSSSFLKSST
TTLLHNLNQAEKSSYVAHINTYLREDPFLRKYLPIDPSGNQLFDLIRDGVLLCKLINVAV
PGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQ
IIKIQLLADLNLKKTPQLVELFDDSKDIDEVLSLSPEKMLLRWMNHHLKKAGYKKTVNNF
SSDVKDGEAYAYLLKALAPEHSPETTLDTKDPDERAKLVLEQAEKLDCKRYLTPKDITEG
SANLNLAFVAQIFQHRNGLTSDTKQVTLTQTATRDDVLLSREERAFRMWINSLGVESYVN
NVFEDVRNGWVLLEVLDKVSPGSVNWKLASKPPIKLPFRKLENCNQVVKIGKELKFSLVN
LAGNDIVQGNKKLIVALLWQLMRFNILQLLNKLRFHSQGSQGKEITDADILNWANSKVKA
SGRTSRMESFKDKSLSNGLFFLELLSAVQPRVVNWKVVTKGEADEDKKLNATYIISVARK
LGCSVFLLPEDIIEVNQKMILTLTASIMYWSLQKQPQSQSEMPEQSEPSSMTSDAASDIA
SEDGASTTAPSESEEVNSLSDSMSNLTTDDATSNAPSTENGNGVAGS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggattcgtcggggtcgtcgtgtccgacccctcgctgcaggggcagttcacg
caggtcgagctccgatcgctcaaggccaagttcgtgtctctgaagagagattccggccat
gtcaccacgaagaatctgccggggctgatgaagaagctgagggggctcaatgaggtggtc
tccgaggaggagatcgccgccttcctgtcggagtcgtaccccgacagcgatcaggagatt
gagttcgagtccttcctccgggagtatctgaatctgcaggcgagggtgagtgccaaggta
ggtggtggtgctggtggtgggggtggcaagacctcatcgtcgttcctcaagtccagcacc
actacgctgctgcacaatctcaatcaggcagagaaatcgtcctacgtggcgcacatcaac
acttatctccgcgaagacccatttctgaggaagtacttgccaatcgacccgtctggaaac
cagctttttgatctgatcagggatggtgttctgctctgcaaattgatcaatgtagctgta
cctgggaccattgatgagagagcaataaataagaaaagagttcttaatccatgggagaga
aatgaaaatcatacactctgcctcaattctgccaaggccattggatgcactgttgtcaac
attggtacacaggatttggtggagggaaggcctcatttagttcttggattgatatcacaa
atcataaagattcaacttttggctgatctgaacctcaagaagacaccgcagctggtggaa
ttgtttgatgacagcaaggatatagatgaggttttgagcttgtcaccagaaaagatgcta
cttcggtggatgaaccatcatctgaaaaaagctggctacaagaaaactgttaacaatttc
tcttcagatgtgaaggatggtgaagcctatgcttaccttctgaaagctcttgctccagag
cattcccctgaaactacattggataccaaggatccggatgagagggcaaaactggtactt
gaacaagcggagaagttggactgtaaaagatacctgaccccaaaggatatcaccgaggga
tctgccaatttaaatcttgcatttgttgcgcaaatattccagcataggaatggtctaacg
agtgacaccaaacaagttacgctcacacagacggcaacacgtgatgatgttctattgtct
agagaagaaagagccttcagaatgtggatcaacagccttggggttgaatcatatgtaaac
aatgtatttgaagatgttcgcaacgggtgggtacttcttgaagtacttgataaggtttct
cctggatctgtcaattggaagctggcatcaaaacctccaattaaattgccattcagaaaa
ctggagaattgcaatcaagttgtaaaaatcgggaaggagttaaagttttctttagtaaat
ctagctgggaatgatattgttcagggaaacaagaaactgattgttgcacttttgtggcaa
ttgatgagattcaatatccttcagctgttaaacaagctaagattccattcccaagggtcc
caaggaaaagaaattactgatgctgatattctaaactgggccaacagcaaagtgaaagca
tcaggaagaacttctcgaatggaaagtttcaaggacaagagcttatcgaatggattgttc
ttccttgagcttcttagcgcagtacagccaagggttgtgaactggaaagttgttactaag
ggggaagctgatgaggacaagaagctgaatgctacctacatcattagtgttgctaggaag
cttggatgctctgtatttctgttgccagaggacatcatagaggtgaatcagaagatgatc
cttacacttaccgctagcattatgtattggagcctacagaaacaacctcagtcacaatct
gaaatgccagagcaatcagagccatctagcatgacttcagatgcagcctctgatattgcc
tcggaggatggagcttcaacgactgcgccatctgagtccgaagaggtgaactcgctgtct
gatagcatgtccaatttgacaacggatgatgctacttcgaacgccccatctaccgaaaat
ggaaatggtgtggcaggatcctga
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