Setaria viridis (green foxtail): 117835913
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Entry
117835913 CDS
T07951
Name
(RefSeq) protein SHORT-ROOT 2
KO
K27743
protein SHORT-ROOT
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117835913
Transcription factors [BR:
svs03000
]
Eukaryotic type
Other transcription factors
GRAS
117835913
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Gene cluster
GFIT
Motif
Pfam:
GRAS
SOG2
Motif
Other DBs
NCBI-GeneID:
117835913
NCBI-ProteinID:
XP_034571136
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Position
9:complement(39940933..39943687)
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AA seq
635 aa
AA seq
DB search
MDTLFRLVSLHQHHHHPQAQAPASSSPDQQQHHHQSPYSSRSTSRSTTSTGSRSSPSHHT
HNNHYYSHSHSHYNSSNSSGSYYYCDPAGGGGGGGGGGGYYYDHQPAAPAPYQEECGNDH
GFYMDEDFSSSSSSRHYHHQSSRAPPAAPSSSPPAPAPPTQPPSTSSGAGGHGGGLFEAA
DFSFPQVDIDLDFSSPATSSGAGGGGGTAASSSGGGGAGRWAAQLLLQCARAVAARDSQR
VQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLAAASDRNTSFESTRR
TALRFQELSPWASFGHVAANGAILEAFLEAAAAAASSSSSSSSSQPPRLHILDLSNTFCT
QWPTLLEALATRSSDDTPHLSITTVVPAAAPSSAAAQRVMREIAQRLEKFARLMGVPFSF
RAVHHAGDLAELDLDGLGLREGGAALAINCVNALRGVAPGGARQRDAFLASLRRLEPRVV
TVVEEDADLVEPDPDASSSEEAASTEAAFIKVFTEGLRFFSAYMDSLEESFPKTSNERLV
LERAAGRAIVDLVSCPASESAERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYR
EGWSLREPGTDDGAAAGVFLAWKEQPVVWTSAWRP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggacacgctgtttcggttggttagcctccaccagcaccaccaccacccgcaggcacag
gcacccgcgtcctcctcgccggaccagcagcagcaccaccaccagtccccctacagctcc
cgctccacgtcccgcagcaccacctccaccggctcccgctcctccccctcccaccacacc
cacaataaccactactactcccactcccactcccactacaacagcagcaacagcagcggc
agctactactactgcgaccccgccggaggaggaggcggaggcggaggtggcggaggctac
tactacgaccaccagccagcagcgccggcgccgtaccaagaagaatgcggcaacgaccac
ggcttctacatggatgaagacttctcctcgtcgtcctcgtcccgccactaccaccaccag
tcgtcgcgcgccccgccggcggcgccctcgtcgtcgcccccggcgcccgcgccgccgacg
cagcccccgtccacgtcgtccggcgccgggggccatggcggcgggctgttcgaggcggcg
gacttctcgttcccgcaggtggacatcgacctcgacttcagcagccccgcgacgtcctcc
ggcgcggggggcgggggcgggaccgccgcctcctcgtcgggcggcggcggcgccgggagg
tgggcagcgcagctactgctgcagtgcgcgcgcgccgtggccgcgcgcgacagccagcgc
gtgcagcagctcatgtggatgctcaacgagctggcctcgccgtacggggacgtggaccag
aagctggcgtcctacttcctccagggcctcttcgcgcgcctcaccacctccggcccgcgc
acgctgcgcaccctcgccgccgcgtccgatcggaacacgtcgttcgagtccacgcgccgc
accgcgctcaggttccaggagctgagcccgtgggcgtcgttcggccacgtcgccgctaac
ggcgccatcctcgaggcgttcctggaggcggcggccgccgccgcgtcttcatcctcgtct
tcgtcgtcgtcgcagccgccgcggctgcacatcctggacctgagcaacaccttctgcacg
cagtggccgaccctgctcgaggcgctggccacgcggtcgtcggacgacacgccgcacctg
tccatcaccaccgtggtgcccgccgccgcgccgtcgtccgctgcggcgcagcgcgtgatg
cgggagatcgcgcagcgcctcgagaaattcgcgcgcctcatgggcgtgcccttcagcttc
cgcgccgtgcaccacgcgggggacctcgcggagctcgacctcgacggcctcggcctccgc
gagggcggcgccgcgctcgcgatcaactgcgtgaacgcgctgcgcggggtcgcgccgggc
ggcgcgcggcagcgcgacgcgttcctcgcctcgctccgccgcctcgagccgcgcgtggtc
accgtcgtcgaggaggacgccgacctcgtggagcccgatccggacgcgtcgtcgtccgag
gaagccgccagcacggaggcggcgttcatcaaggtcttcaccgagggcctccggttcttc
tcggcgtacatggactccctggaggagagcttccccaagaccagcaacgagaggctcgtt
ctggagagggcagccgggcgcgccattgttgacctcgtgtcctgcccggcgtcggagtcc
gccgagaggcgggagacgggggcgtcgtgggcgcggcggatgcggtcggccggcttctcc
ccggtggcgttcagcgacgacgttgccgacgacatgcggtcgttgctgcggcggtaccgg
gaggggtggagcttgcgggagccaggcaccgacgacggcgcggcggcgggggtgttcctg
gcgtggaaggagcagcccgtcgtctggacaagcgcgtggaggccatga
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