Setaria viridis (green foxtail): 117836214
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Entry
117836214 CDS
T07951
Name
(RefSeq) probable histone H2A variant 1
KO
K11251
histone H2A
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117836214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117836214
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117836214
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
117836214
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117836214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
Histone_H2A_C
CBFD_NFYB_HMF
FitA-like_RHH
Motif
Other DBs
NCBI-GeneID:
117836214
NCBI-ProteinID:
XP_034571487
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Position
9:complement(53196250..53197197)
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AA seq
138 aa
AA seq
DB search
MAGKGGKGLLAAKTTAAKSTDKDKDKKKAPVSRSSRAGLQFPVGRIHRQLKSRASAHGRV
GATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAG
GGVIPHIHKSLINKTAKE
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagggaggtaagggtctgctggcggcgaagacgacggcggcgaagagcacc
gacaaggacaaggacaagaagaaggctcccgtctcccgctcctcccgcgccggcctccag
ttcccggtgggccgcatccaccgccagctcaagtcccgcgcctccgcccacggccgcgtc
ggcgccaccgccgccgtgtactccgccgcaatcctggagtacctgaccgcggaggtcctg
gagctggccggcaacgccagcaaggacctcaaggtcaagcgcatcaccccgcgccacctc
cagctcgccatccgcggggacgaggagctggacacgctcatcaaggggaccatcgccggc
ggtggcgtcatcccccacatccacaagtccctcatcaacaagaccgcgaaggagtga
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integrated database retrieval system