Setaria viridis (green foxtail): 117836220
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Entry
117836220 CDS
T07951
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117836220
Enzymes [BR:
svs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117836220
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117836220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
117836220
NCBI-ProteinID:
XP_034571496
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All DBs
Position
1:36176677..36182270
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AA seq
721 aa
AA seq
DB search
MAKKGPKSKQPPPPVTAAKKGSKAAPPPKAAKRVPKKQELLESSDDSDTEPQQLQEEDSD
LDVPSDSDAEELSGSDAEADELSGSDADADGGSSSGDEVEENEEEEGDDESDDDPLADDF
LADSDEGSEGGDSGVESDDSDDLEAKSRAIDERKRKVEEEADDELTTNIRSESDEFRLPT
AEELEEEAHLPPNLPNLKRRISEIVRVLSNFTKLRQKDVPRKDYVNQLKTDIISYYGYND
FLVEALIEMFPAVELVELLEAFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWS
KVGLVVYDSTISAGATTEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYI
GALMKNTGIIYANEFNEKRLHGLLGNIHRMGVTNTIVCNYDGKELPKVLGMNSVDRVLLD
APCTGTGTIWKDPQIKTSKDIDDIRNCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSIM
IPENEAVIDYALKKRNVKLVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFF
VAKLKKLSNTIPVTSESSKASEVAAEKADPSGDDEDKKAVPEEQEQEKGVPDKDEKAVRM
KNHKETKKSNKERSVPKETTHVPDRPAKHLKKQKKDAMETDGPESTEKNGDGKEVHQEQT
KQAGHKKKFASDRTKKFGPKSTSGIKEKKPVSDKKRKRKWQFKLRRDWENMKEKSDKRRK
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaggggccgaagagcaagcagccgccgccgccggttaccgcggcgaagaag
gggagcaaggcggcgcccccaccgaaggcggcgaagagggtgccgaagaagcaggagctt
ctcgagtcctccgacgactcagatacggagccgcagcagctccaggaggaggactccgac
ctcgacgtcccctccgattccgacgccgaggagctatccgggtcggacgctgaggccgat
gagctctctggctcggacgccgatgccgacggaggctccagcagcggcgacgaggtggaa
gagaatgaggaggaggagggagatgatgaaagcgatgatgacccccttgcggacgacttc
ctcgctgatagtgacgaaggaagcgagggtggtgactctggagtggagtctgacgattct
gatgacctcgaggccaagtcaagagcaattgatgaacggaagcggaaggtggaagaagag
gcagatgacgaacttacaaccaacataagatcagaatctgatgagttcagattaccaaca
gccgaggaactggaggaagaggcacatttacctcctaacctaccaaatctcaaaaggagg
atatcagaaattgttcgagtcctctcaaacttcaccaagctgaggcagaaagatgtccca
cggaaagattatgtcaatcaactcaaaactgacatcatatcatactatgggtataacgat
tttctcgttgaagcattgattgagatgttccctgctgttgagcttgttgagctattggaa
gcttttgagaaaagaccacctgagtgcttgcggacaaatacattaaagaccaggaggaga
gatcttgctgctgctcttataccaagaggatttaatctagacccaataggcaaatggtca
aaggtaggattagttgtctatgactccaccatttcagctggtgctactactgaatatatg
gctggacattacatgaaacaaggtgcaagttctttcttaccggtgatggcacttgctccc
caggagaaggagcgaattgttgatatggcagctgccccaggtggcaagactacttacatc
ggtgctcttatgaagaatactggaatcatctatgcaaatgagttcaatgagaaaaggttg
catggactgttgggcaacatccatcgcatgggtgtgacaaataccatagtttgtaactat
gatggtaaagagttacccaaagttctcgggatgaattcggttgacagagtattgctggat
gctccctgcacaggaactgggaccatttggaaggatccacaaataaaaacatcaaaggac
attgatgacattaggaactgtgcctttgttcaaaagcaattgttgctagctgctattgac
ttggttgatgccaactccaaaaccggtggttacattgtttactcaacttgttcaataatg
atcccggagaacgaggcagtaattgactatgcacttaaaaagagaaacgtaaagcttgtg
ccttgcgggttggattttggacgcccaggattcatccggttccgggaacatcggttccat
acttcgttagacaaaacaagaaggttttatcctcatgtcaacaacatggatggatttttc
gtggctaagctgaaaaagttgagcaatacaattcctgttacatctgagtcgtccaaagca
tctgaagtagcagctgagaaagctgatcctagcggggatgatgaagataagaaagctgtt
cctgaagaacaagaacaagagaaaggtgttcctgataaagatgagaaagctgttcggatg
aaaaatcacaaagagactaagaagtctaataaagaaagaagcgtccccaaagagactaca
catgtacctgataggccagcaaagcatcttaagaaacaaaagaaggatgcaatggaaact
gatggccctgaaagcacggaaaaaaatggagatgggaaagaagtgcaccaggagcagacc
aagcaggcaggccacaagaagaagtttgcttctgatagaaccaagaaatttggccctaag
agcacctcaggtatcaaagagaagaaaccggtgagtgacaagaagcgaaaaaggaagtgg
caattcaagctgaggcgagactgggaaaatatgaaagagaaatctgacaagaggaggaaa
gtatga
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