Setaria viridis (green foxtail): 117836386
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Entry
117836386 CDS
T07951
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117836386
03012 Translation factors [BR:
svs03012
]
117836386
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117836386
Translation factors [BR:
svs03012
]
Eukaryotic type
Initiation factors
eIF-3
117836386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
RRM_1
WD40_WDHD1_1st
ANAPC4_WD40
Tricorn_2nd
Beta-prop_ELP1_1st
WD40_Prp19
Beta-prop_Aladin
Es2
BORG_CEP
Motif
Other DBs
NCBI-GeneID:
117836386
NCBI-ProteinID:
XP_034571685
LinkDB
All DBs
Position
9:35421488..35425982
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AA seq
720 aa
AA seq
DB search
MALTTSMEGLEARARELAVDLSAVDLDSITLPAGEDFGILSDDEEVLRNEDPPELEMGLS
NIMVVDNLPVVPPEKFEKLENVIRKIYSQIGAIKENGLWMPVNPETKKTYGYCFIEYNTP
QEAELAREKTNGYKLDKSHIFAVNMLDDFEKYMKVPDTWTPAEIKPYTPGENLLKWLTDE
KARDQFVIRAGTLTEVYWNDARKQAPELVFQKQYWTDSFIQWSPLGTYLATVHRQGSQVW
GGENGFERLMRFAHPMVKLIDFSPGERYLITYSSHEPSNPRDTHRVVLNIFDVRTGKVMR
DFKGSADEFTAGGNIGVSGVSWPIFRWGGGKDDKYFARLGKNIISVYETDTFSLLDKKSL
KVENVVDFSWSPTDPIISLFVPEMGGGNQPARVSLVQIPGKEELRQKNLFSVSDCKMYWQ
NNGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRF
AIIHGDGPRPDVSFYTMRTANNTSRVSKLTTLKAKQANALFWSPAGRFIVLAGLKGFNGQ
LEFYNVDELETMATGEHFMATDIMWDPTGRYLATAVTSVHEMENGFQIWSFNGKHLYKVS
KDHFYQFIWRPRPPSLLTPEKEEEISKNLKKYSKKYEQEDQDAFNQLSEQERKRRTQLQE
EWDSWVAKWKQIHEEERAYRRELRDGDASDEEEEYEAKEVEVEEVVDVTEEVLAFDLDQE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacaacctccatggaagggctcgaagcgcgggcgcgggagctcgcggtggac
ctctccgccgtcgatctggactccatcaccctcccggccggcgaggacttcggcatcctc
agtgacgacgaggaggtacttcggaatgaggaccctcctgaacttgaaatgggtttatcc
aacattatggtcgtggacaatctgccggttgttcctccagaaaagtttgagaagctggag
aatgttattcgcaagatctacagccaaattggagcgataaaagaaaatggtctatggatg
ccggtaaacccagagacaaagaagacatatggctactgtttcatcgagtataatacccct
caggaagctgagcttgcaagggaaaaaacaaatgggtacaaactcgacaaatctcatata
tttgcagttaatatgcttgatgactttgagaagtacatgaaggttcctgacacatggacg
cctgctgaaataaagccgtacactcctggagaaaatcttctgaagtggctaactgatgaa
aaggcccgcgatcaatttgtcatccgtgctggtacattgaccgaagtttactggaatgat
gctagaaagcaggcaccagaacttgtgtttcaaaaacagtactggacagatagtttcatt
cagtggtcccctcttggaacatacttggcaaccgttcataggcagggatcacaggtgtgg
ggtggtgaaaatggctttgagcggttaatgcgttttgctcatccaatggtaaaactgatt
gacttttctcctggtgagagatacttgatcacatacagcagccatgagcccagcaaccct
cgagacacacatagggttgtcctgaatatctttgatgtaaggactgggaaagtgatgcga
gacttcaagggaagtgctgatgagtttaccgctggcggtaatattggcgtttctggtgtc
tcatggcccatatttaggtggggtggtggaaaggatgataaatattttgcaaggcttggg
aagaacataatatctgtctatgaaactgatacgttctcccttcttgacaagaagtccctg
aaggtagaaaatgtagtggacttcagctggtctcccacggatccaatcatatcccttttt
gtgcctgaaatgggtggtgggaatcagcctgcaagggtgagtcttgtgcaaattccaggc
aaagaggagctgcggcagaaaaaccttttcagtgtcagtgactgcaagatgtattggcag
aataatggagaatatcttgctgtccaggttgataggtatacaaaaacaaagaagagcacc
tacactgggtttgagttgtttagaattaaggagagagacatcccaattgaggtccttgaa
ctcgagaacaagaatgacaagattattgcatttgcctgggaacctaaagggcatcgcttc
gctatcattcatggcgatggccctaggcctgatgtcagtttctacaccatgcgaacagca
aacaacactagccgtgtctcaaagctcacgactctcaaggccaagcaagctaatgcattg
ttttggtctcctgctggccgcttcattgttcttgctgggctgaagggatttaatgggcag
ctagaattctacaatgttgatgagcttgaaactatggcaacaggagagcattttatggca
acagacataatgtgggatcctactggaaggtatcttgcaactgcagttacctcagtccat
gagatggagaatggatttcaaatatggtccttcaatggcaagcacctttacaaggtgtca
aaggatcacttctatcagtttatatggcgtccgagaccgccatcacttttgactcctgag
aaggaagaggagatctcgaagaacctgaagaagtacagcaagaagtacgagcaagaagac
caggatgcattcaaccagctgagcgagcaggagcgcaagaggcggacacagctccaggaa
gaatgggactcatgggttgccaagtggaagcagatacatgaggaggagcgtgcatatagg
agggagcttagggatggggatgccagtgacgaggaggaagagtacgaggccaaggaggtt
gaggtggaggaagtggtggatgtcacggaagaagttctcgcattcgacctggatcaggag
tga
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