Setaria viridis (green foxtail): 117836404
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Entry
117836404 CDS
T07951
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117836404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117836404
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117836404
INO80 complex (yeast)
117836404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117836404
NCBI-ProteinID:
XP_034571708
LinkDB
All DBs
Position
9:complement(43869752..43881190)
Genome browser
AA seq
1509 aa
AA seq
DB search
MDPRRAPPRGGGANGGGGGGLSYSALFNLEPLLNFRVPVPEDLARYGHSSPNGSGSSEGH
GSLLDQYNGINDASHGLHRKRKRHLDGASDDDEADGYSNRITEEHYRTMLSEHVQKYRRS
KFKEGAFGSDPPRVASPQIKDKNGGKKTMKHISDFRNVATLDEVEASHEYSGIECIKTYG
GFNKLVASLDSTYLDMGDNIRYSIPEGYDKLASSLNLPVSSDIRVEEHFLKGMLDLRTLA
AMLGTDQKFEASNRGGLSEPLPQFESLQERVKVQKFSLQVTEDPFAIPEGAAGRIRRFII
SEAGNLQVHYVKVLEKGDTYEIIERSLPKKQIIKKEPSVIVKEEAEKTYKLWQSLATKSI
PKHHRNFNALLKKRQVDAKRFSDSCQREVKLKVSRSLKLMRCAAIRTRKLARDMLIFWKR
VDKEQYELRKKEEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKTGASAPP
DEEDVPDEDEEEDPEEAQLKREALRAAQHAVSQQKMKTNAFDSEIVRLRQTSESGLPTDD
SSSMDPSKIDLLHPSTMPEKSSVQTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEM
GLGKTVQAMAFLSHLAEDKNIWGPFLVVAPASVVNNWAEELIRFCPDLKILPYWGPERIV
LRKNINPKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKT
LLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGAL
NEHQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCKLSSRQQVFYQAIKNKISLNEL
LDGSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPPFGELQ
DVYYAGKRNPITFEIPKLVYEGIIRNMEISGNGCGFRSGYLNRLFNIFLPSNIHCSAIPE
ASSSDVSVLSSGVFGFTRLSNISPVEASFLATSSLFERLAFLAMQLNRNYTDEIMDAFID
SEGPDVFSQNDSTSIRAVARLLSSTKTKPSFLRTKIGTGPGDCPYEALVLSHHDRLASNI
RLLRSAYAFIPPARAPPINVWCADRNFAYKFTDEMHDPWAKKLFLGFARTSEFNGPRQPA
GLHPLIQELHTDLPVLEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDMLLRRLRA
EGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDVFVFLLS
TRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKIL
QRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLLLDDTQIAHKLKEISMQAKDRQKKRRA
KGIKVDKEGDLTLEDLDDATAEAVDQDNATNKKKKSSHKKHSRTHDNDNVDKNGEAPTGG
DLTGSGHAENEQIAEPRPKRSKRLMKGMSDDKEPAAAADHEKPADEVENHTGHEYDDTEE
VQDGVKSTE
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgccgcgcccccccgcgcggcgggggcgccaacggcggcggcggcggcggg
ctctcctactccgcgctattcaacctcgagcctttgctgaacttcagggttcctgtacca
gaagatcttgcccgctatgggcatagcagcccgaatgggagtggaagcagcgaaggtcat
ggatctttgttggatcagtacaacggtataaatgatgcttcccatggcctgcatcggaag
cgtaaaaggcatctggatggtgctagtgatgatgatgaggcagatggatatagtaaccga
ataacagaggagcactaccgtacaatgctcagtgaacatgtccagaagtacaggaggtca
aagttcaaggagggtgcttttggttctgatcctcctcgtgtggcaagtccccaaataaaa
gacaaaaatggtggtaaaaaaactatgaagcacataagcgatttcaggaatgttgcaaca
ttggatgaagtagaagcctcacatgagtacagtgggatagaatgtattaaaacctatggt
ggttttaataagcttgtagcgtcccttgattccacctatttagatatgggggataatata
cgctactcaattccggagggttatgataagttagcatcatcccttaatctgcctgtttct
tctgatatacgcgtcgaggaacacttcttaaagggcatgctagatttgcgcaccctagca
gcaatgcttggtactgaccaaaagttcgaggcttccaatcgtggtggattatctgaacct
ctgccacagtttgaatctcttcaggaaagggtaaaggtgcagaaattttctcttcaagtt
actgaggacccctttgcaatcccagaaggagcagctgggagaatacggaggtttattata
tcagaagctggcaatttgcaggttcattatgttaaagtcttggaaaaaggagatacatat
gagattatcgagcgtagcttaccaaagaagcaaataataaagaaggaaccttctgtaatc
gtgaaagaagaggccgaaaaaacttacaaactatggcagtctcttgctaccaaaagcatc
ccaaagcatcacaggaatttcaatgctttgctgaagaaacggcaagtagatgcgaagcgc
ttctctgatagttgccaacgggaggtaaaactcaaagtaagccggtcactgaaactgatg
agatgtgctgcaatacgtacaaggaagctggctagggatatgctgatattttggaaaaga
gtagacaaagagcagtatgagttaaggaaaaaagaagaaagagaagctgctgaagctttg
aagcgtgaggaggagctacgtgaagcaaaaagacagcaacagaggctaaactttctgctt
tcacaaacagagctttatagtcatttcatgcaaaacaagactggtgcctcagcaccgcct
gatgaggaagatgtccctgatgaagatgaggaagaagatcctgaggaggctcaattaaag
cgagaggccttgagagcagctcagcatgctgtctctcaacaaaagatgaagacaaatgca
tttgatagtgaaattgtgaggcttcgtcagacttccgagtctggtcttccaactgatgat
tcatctagcatggacccaagcaagattgatttattacacccttcaacaatgcctgagaag
tcatctgtgcagacaccggagttgtttaagggtgtattaaaagagtatcagttaaagggc
ttacagtggctggttaattgttatgagcaggggttgaatggcattcttgctgatgagatg
ggtcttggcaaaaccgttcaggctatggcattcctgtctcatttggctgaggacaaaaat
atatggggcccctttcttgtggtggctcctgcatctgttgtgaataattgggctgaggag
ttgattagattctgccctgacctaaagatacttccttactggggcccagagaggatagtt
ctccggaagaatatcaaccccaagcgtctttatcgcagagatgctagcttccacattctt
attacaaactatcagatacttgtgaatgaagagaagcttttgagacgtgttaagtggcaa
tacatggtgctggatgaggcccaggctataaaaagttcaagcagccagcgctggaagaca
ttgctgagctttaactgtagaaatcgtttgctgctcactgggacaccgatacagaataat
atggctgagttatgggcacttcttcatttcatcatgcccacactatttgacagccatgaa
caattcaacgagtggttctcaaagggtattgagggtcatgctgagcatgggggagctttg
aatgaacatcagcttagtcgactgcatgcaattttgaagccctttatgctgcgccgggtt
aagattgatgtcatcgctgaaatgaccaaaaagaaagaagaaattgtcccctgcaaattg
agttctcgtcagcaagtcttctatcaagccataaaaaataagatatctcttaatgagctg
cttgatggaagtcgcggcaatctaaatgataagaagttacttagcctgatgaatattgtc
atgcagctacggaaggtctgcaatcacccggagctgtttgagcgcaatgagggaagttct
tacttttactttgctgatatcccaaactcacttctctctcccccgtttggggaattacaa
gatgtatattatgccggcaagagaaatcctataacgtttgagattccaaagttagtgtat
gagggaatcatccgcaacatggaaatttctggaaacggctgtggatttcggagtggatat
ttgaacaggctgtttaatatatttttgcccagcaatatccattgttcagccattccagaa
gctagttcatcagatgtgtctgttctatcatctggtgtatttggctttacgcgtttatca
aatatatccccagttgaagcttccttcttggccacttcttcattgtttgagagactagca
tttttagcaatgcaattgaataggaactacactgatgaaattatggatgcattcattgat
tcagaaggtcctgatgtctttagtcagaatgattccacaagcattcgtgcagttgctcga
ttgctttcttctacaaagaccaagcccagttttcttagaacaaagattggaactggccca
ggtgattgcccatatgaagcactggtgctttctcatcatgacaggcttgcatcgaacata
aggcttcttcgttcagcatatgcttttattccgccagctagagcaccgcctataaatgtt
tggtgtgccgatagaaattttgcctacaagttcaccgatgagatgcatgatccttgggcc
aagaaactgttcctgggatttgctcgtacttccgagttcaatggtcctagacaaccagct
ggtctccatcctctgatacaagaactacatactgatttgcccgtacttgagccgatgctg
cagctaccctataggatatttgggtcttctccgccgatgagtaattttgatccagctaaa
atgctcactgattctgggaagctccacaccttagatatgctattacggcgccttcgagct
gaaggtcatcgtgtgctcctttttgctcagatgactaaaatgttggacatccttgaggat
tacatgaatttcagaaaattcaagtacttcagacttgatgggtcttctgcaatctcggac
cgtcgtgacatggtccgagatttccagaataggaatgatgtatttgttttcttgttaagc
acaagagctggtgggcttggtataaatttgaccgctgctgatacagttattttttatgaa
attgactggaatccaactcaagatcagcaggcaatggatagaacacacagacttggtcag
acaaaagaggtaactgtgtatagacttatatgcaaagatactattgaggagaaaatattg
caaagagcaaagcaaaaaaatgcagtgcaagagttggtcatgaaggggaaacatgtccag
gacgatcatttgatgagacaagaggatgttgtttcattacttcttgatgacacacaaatt
gcacataagttgaaagaaatatccatgcaggcaaaggatcgacaaaagaaaagacgagcg
aagggcatcaaggtcgacaaagaaggagatttaacactagaggacttggatgatgctact
gcagaagctgtagatcaagataacgcaaccaacaaaaagaaaaagagctcacacaagaaa
cattcgaggacacatgataatgacaatgtggacaagaacggagaggcccctacaggaggt
gatcttacagggagtggtcacgcagaaaatgaacaaattgctgaaccaaggcctaaaaga
tcaaaaaggctgatgaagggcatgagtgatgataaggaaccagctgctgctgctgatcat
gagaaaccagcagatgaagtggaaaatcacacaggccatgaatatgatgatacagaagag
gtgcaagacggagtgaaatctactgaatga
DBGET
integrated database retrieval system
