Setaria viridis (green foxtail): 117836422
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Entry
117836422 CDS
T07951
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00250
Alanine, aspartate and glutamate metabolism
svs00410
beta-Alanine metabolism
svs00430
Taurine and hypotaurine metabolism
svs00650
Butanoate metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117836422
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
117836422
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
117836422
00430 Taurine and hypotaurine metabolism
117836422
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
117836422
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
PRIMA1
Motif
Other DBs
NCBI-GeneID:
117836422
NCBI-ProteinID:
XP_034571736
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Position
9:complement(49394848..49397642)
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AA seq
490 aa
AA seq
DB search
MVLSKAVSESDMSVHSTFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNL
ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESETAVG
VGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELRE
VKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLEVKNRETGWETP
IHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYAGIGWCIWRNKEDLPEEL
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCHENAMVLKEGLEK
TGRFNIVSKDEGVPLVAFSLKDRSRHDEFEISDMLRRFGWIVPAYTMPPDAQHVTVLRVV
IREEFSRTLAERLVLDIEKVMYQLDALPSRLPPPPPPALLVKKKSELETQRSVTEAWKKF
VLAKKTNGVC
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctccaaggccgtctccgagagtgacatgtccgtgcactccacgttcgcgtcg
cgctacgtccgcgcttcgctcccaaggtaccgcatgccggagaactcgatcccgaaggag
gcggcgtaccagatcatcaacgacgagctgatgctggacgggaacccgcgcctgaacctg
gcgtccttcgtcaccacctggatggagccagagtgcgacaagctcatcatggccgccatc
aacaagaactacgtcgacatggacgagtaccccgtcaccaccgagctccagaaccggtgc
gtgaacatgatcgcgcatctcttcaacgcgccgctcggcgagtccgagacggcggtgggc
gtcggcacggtgggctcgtcggaggccatcatgctggccgggctggccttcaagcgcagg
tggcagaacaagcgcaaagccgagggcaagccgttcgacaagcccaacatcgtcaccggc
gccaacgtccaggtttgctgggagaagttcgcgaggtatttcgaggtggagctcagggag
gtgaagctgcgggacggctactacgtgatggacccggagaaggcggtggagatggtggac
gagaacaccatctgcgtggccgcgatcctgggctccacgctcaacggcgagttcgaggac
gtcaagctgctcaacgacctgctggaggtgaagaacagggagaccgggtgggagacgccc
atccacgtggacgcggcgagcggcgggttcatcgcgccgttcctgtacccggagcttgag
tgggacttccgcctgccatgggtgaagagcatcaacgtcagcggccacaagtacggcctc
gtctacgccggcatcggctggtgcatctggcgcaacaaggaggacctgccggaggagctc
atcttccacatcaactacctcggcgccgaccagccgacgttcacgctcaacttctccaag
ggctccagccaagtcatcgcgcagtactaccagctcatccgccatggcttcgaggggtat
aggaacatcatggagaactgccacgagaacgccatggtgctcaaggaggggcttgagaag
acggggcgcttcaacatcgtgtccaaggacgagggcgtgccgctggtggccttctcgctc
aaggaccgcagccggcacgacgagttcgaaatctccgacatgctgcgccgcttcggctgg
atcgtgccggcctacaccatgccccccgacgcgcagcacgtcacggtgctccgcgtcgtc
atccgggaggagttcagccgcaccctcgccgagcgcctcgtcctcgacatcgagaaggtc
atgtaccagctggacgcgctcccgtccaggctcccgccccctcccccgccggcgctgctg
gtcaagaagaagtcggagctcgagacgcagaggtcggtcacggaggcgtggaagaagttt
gtgctcgccaagaagaccaatggcgtctgctag
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