Setaria viridis (green foxtail): 117836427
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Entry
117836427 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117836427
Enzymes [BR:
svs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
117836427
Ribosome biogenesis [BR:
svs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
117836427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF3253
CSN7_HB_subdom
Motif
Other DBs
NCBI-GeneID:
117836427
NCBI-ProteinID:
XP_034571741
LinkDB
All DBs
Position
9:20361425..20371029
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AA seq
336 aa
AA seq
DB search
MASLLRLQALAPTLNVPRRRCFLSSFRLSSTATTPLARRLSTAASTNSPEPPASEADLES
GLYLVATPIGNLEDITLRALRVLKCANVILSEDTRHSGKLLQHYNIKTPLLSFHKFNERE
REPSILRRLHEGEAVALISDAGTPGISDPGMELARLCAAEKIPVVPIPGPSAAVAALSAS
GLPSNEFTFVGFLPKHARSRRDRLEISAREAATQIFYVPPHGIHQFLVDAASSFGDSRSC
VIAREITKLHEEFWRGTLGEANEAFATRQPKGEITVLIEGQSISVDDTPSEDFLEHELRE
LTAKGHTLSAAVKLVTEATSAKKKDVYALALRLFGK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgctccgcctgcaggccctcgctccaaccctaaatgtcccccgccgccgt
tgcttcctctcctctttccgcctctcctccacggccacgactccgctggcgcgccgcctt
tccaccgccgcctccaccaactcaccggagccgccagcctcggaagcggatctggagtca
ggtctgtatcttgtggcaacgccaattggtaaccttgaagatatcaccttacgggcactg
cgcgtccttaaatgcgctaatgtgatattatctgaagacacaaggcattctggaaagctg
cttcagcattataacatcaaaacaccacttcttagcttccataagttcaatgagcgtgag
agagagcccagtatcttaaggaggcttcacgaaggtgaagcggttgcattgataagtgat
gctggtactccaggcattagtgaccccggcatggaactggcaagactatgtgcagctgag
aaaattcctgttgttcccattcctgggccttctgctgcagttgctgctctttctgcgtcg
ggtttgccatctaatgaattcacatttgttgggtttttaccaaagcatgctcggtcaaga
agagataggcttgagatatctgctcgtgaagctgctacacaaatattctatgttcctccc
catggcattcatcaatttcttgttgatgctgcttcatcttttggcgattcaaggtcatgt
gttattgcaagggagataacgaaattacatgaagagttctggcgtggaactctaggtgaa
gcaaatgaagcctttgctactcgacagccgaagggagaaatcacagtgctcatagaggga
cagtccatttcagttgatgacactccatcagaggatttccttgagcatgaactaagagaa
ttgacagcaaagggacatacactttcagcggcggtgaaattggtcactgaagctacatca
gcaaagaagaaagatgtttatgcgcttgcattgaggttgtttggaaaatga
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