Setaria viridis (green foxtail): 117836690
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Entry
117836690 CDS
T07951
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 4 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117836690
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
117836690
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117836690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
117836690
NCBI-ProteinID:
XP_034572053
LinkDB
All DBs
Position
9:45095102..45098961
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AA seq
499 aa
AA seq
DB search
MAKQKASPPAAVRRRLGGAGASAVGWALRVATSIVAWTLLLHLFTFLGIPRPTLPIARPS
CLGGRNNSAAAEAVVAAGEAMHLAPPALPPRRLYKSNGYLLVSCNGGLNQMRAAICDMVT
VARYLNMTMVIPELDKQSFWADPSDFRDIFDVNHFIDSLRGEVKIIKGLPQKFSEKVPLS
MQPISWSSEKYYLRQILPLVRKHKVVRFSKTDSRLANNGLPLKLQKLRCYVNYNALRFTP
SIEALGNKMVSVLRSTGSFIVLHLRYEMDMLAFSGCTHGCSDEEMEELTRMRYAYPWWKE
KEIDSEKKRLEGLCPLTPGETTLVLKALGFPRDTRIYIASGEIYGGEKRLAVLKTEFPNI
VRKEMLLSDDELRPFQKHSTQMAALDYLVSVASDVFIPSNDGNMAKVVEGHRRFTGFRKT
IQLDRKKLVELIDLFEDQELSWEEFSAAVKELHMGRMSQPTRRRVIPGQPKEEDYFYANP
HECLGPARKRRERLKHIEI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagaaggcctcgccgccggccgcggtccgccgccgcctcggcggcgccggg
gcatccgccgtcgggtgggcgctgcgcgtcgcgaccagcatcgtggcctggacgctgctc
ctccacctcttcaccttcctcggcatcccccgcccgacgctgcccatcgcgcgcccgtcc
tgcctgggcggccgcaacaactccgcggccgccgaagccgtggttgcggccggcgaggcc
atgcacctggcgcccccggctctgcctcccaggagactttacaagagtaatggctatctt
cttgtttcgtgcaatggtggtctgaatcaaatgcgagcagcgatatgcgacatggtaact
gtagcacgctacttgaatatgactatggtgatacctgaacttgataagcaatccttctgg
gctgatcctagtgattttcgggacatatttgatgtaaatcatttcatcgattcattgaga
ggtgaagtgaagattatcaaaggactcccacaaaagttcagtgaaaaagttcctctgtca
atgcagccaatcagttggtctagtgagaaatactatttgaggcagatcttgcctctagta
cgaaaacacaaggtggtacgttttagcaagacagattcacgacttgcaaacaatggcctt
cctctgaagctccaaaaacttcgctgctatgttaactacaatgcattgagatttacacca
tccattgaggctctaggcaacaaaatggtctcagttcttaggagtactgggtcttttatt
gtgcttcatctgagatatgagatggatatgcttgctttctctggctgtacacatgggtgt
tctgatgaagaaatggaagagttaacaagaatgaggtacgcatatccctggtggaaggaa
aaggaaatagactctgagaagaaaaggctcgagggattgtgtccccttactcctggagaa
acaacattagttcttaaagctcttggtttccccagagacactcgaatatatattgcctca
ggtgaaatatatggtggtgaaaaaagattagctgtattgaagacagaatttcctaacatc
gtgcggaaggagatgcttttatctgatgatgagttacgaccctttcagaagcactcaact
cagatggcagcactggactatcttgtttctgtcgcaagtgatgtttttatccccagtaat
gatggaaacatggctaaagttgtagaaggacaccgcaggtttacaggcttccgcaaaaca
atacagttggacaggaagaagctagttgagcttatagatctttttgaagatcaggagctg
tcctgggaagaattctctgccgctgtcaaggagctccacatgggccgaatgagccagccc
accagaaggagagttatccccggacaaccgaaggaagaggactacttctatgctaatcct
catgaatgccttgggcctgcaagaaagcgaagggaaaggttaaagcatattgagatttga
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