Setaria viridis (green foxtail): 117836761
Help
Entry
117836761 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117836761
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117836761
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117836761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
HTH_77
Motif
Other DBs
NCBI-GeneID:
117836761
NCBI-ProteinID:
XP_034572141
LinkDB
All DBs
Position
9:30596472..30598559
Genome browser
AA seq
539 aa
AA seq
DB search
MEAAPSTAAVMERERLTAEVDVVAEAAAAQPSSFVVKIRRRLPDFARSVNLKYVRLGLRS
GGLPTASSWVPLALAPPLLAAAAHSLVGVDKLYSLDLLTCVAWLGAAALLLTVYFLKRPR
PVYLVDFACYRPGDEHSISKEGFLEMTESTGFFNAEALEFQTKITRRSGLGDQTYLPPGI
QARPPRLSMAEARAEAEAVMFGCLNALFAATGIDPRRDVRVLIVNCSLFNPTPSLASMVV
HRYRMREDVKSFNLGGMGCSAGLIAVDLARDMLQANPGCYAVVVSTENITLNWYFGNDRS
MLLSNCIFRMGGAAGLLSNRAADAGRAKYRLLHTVRTHKGAADECYGCVYQREDGTGRVG
VSLAHELMAVAGDALKTNITTLGPLVLPLSEQLKFLRSLVLQRLLRISRGGGARPYIPDF
RRAFEHFCVHAGGRAVLEEVQRSLGLRDADMEPSRCTLHRFGNTSSSSLWYELAYAEAKG
RVRRGHRVWQIGFGSGFKCNSAVWRALRDVAPVPADGTGGGSCNPWVDSIQNYPPKAYI
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcgccgtcaacggcggcggtcatggagcgcgagcgcctcactgccgaggtg
gacgtcgtcgccgaggccgccgcggcgcagcccagcagcttcgtcgtcaagatccgccgc
cggctgccggacttcgcgcggagcgtcaacctcaagtacgtccgcctcggcctgcgctcc
ggcggcctccccacggcctcgtcctgggtcccgctcgcgctcgcgccgccgctcctcgcc
gccgcggcgcactcgctcgtcggcgtggacaagctctactcgctcgacctgctcacctgc
gtcgcgtggctcggcgccgccgcgctgcttctcacggtgtacttccttaagcgcccccgg
ccggtgtacctggtggacttcgcgtgctacaggcccggcgacgagcactccatctccaag
gaggggttcctggagatgaccgagagcacgggcttcttcaacgccgaggcgctcgagttc
cagaccaagatcaccaggcgctcgggcctcggcgaccagacgtacctcccgccggggatc
caggcgcggcctccgcggctgtcgatggccgaggcccgcgcggaggccgaggccgtcatg
ttcggctgcctcaacgcgctgttcgcggccacggggatcgacccgcgccgcgacgtgcgc
gtgctcatcgtcaactgcagcctcttcaacccgacgccgtcgctggcgtccatggtggtg
caccggtacaggatgcgggaggacgtcaagtcgttcaacctcggcggcatgggctgcagc
gccgggctcatcgccgtggacctcgccagggacatgctccaggcgaaccccgggtgctac
gctgtggtggtgagcaccgagaacatcacgctcaactggtacttcggcaacgaccgctcc
atgctgctgtccaactgcatcttccgcatgggcggcgcagccgggctgctgtccaaccgc
gccgccgacgccgggcgcgccaagtaccggctgctccacacggtgcgcacccacaagggc
gccgcggacgagtgctacgggtgcgtgtaccagcgcgaggacggcaccggccgcgtcggc
gtgtcgctggcgcacgagctcatggccgtcgccggcgacgcgctcaagacgaacatcacg
accctgggcccgctggtgctcccgctgtcggagcagctcaagttcctcaggtccctcgtg
ctccagcggctgctccggatctcccgtggcggcggagcccgcccctacatcccggacttc
cggcgcgcgttcgagcacttctgcgtgcacgccggcggccgcgccgtgctggaggaggtg
cagcgcagcctggggctcagggacgccgacatggagcccagcaggtgcacgctgcaccgg
ttcggcaacaccagcagcagctcgctctggtacgagctcgcctacgccgaggctaagggc
cgcgtccggcgcggccaccgcgtgtggcagatcgggttcggctccgggttcaagtgcaac
agcgccgtctggcgcgcgctccgcgacgtggcgcccgtgcccgccgacggcaccggcggc
ggcagctgcaacccgtgggtggacagcattcaaaactacccgccgaaagcgtacatctga
DBGET
integrated database retrieval system