KEGG   Setaria viridis (green foxtail): 117836803
Entry
117836803         CDS       T07951                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03420  Nucleotide excision repair
svs03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117836803
   03460 Fanconi anemia pathway
    117836803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svs03032]
    117836803
   03400 DNA repair and recombination proteins [BR:svs03400]
    117836803
DNA replication proteins [BR:svs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    117836803
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117836803
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 117836803
NCBI-ProteinID: XP_034572195
LinkDB
Position
9:complement(56373998..56378705)
AA seq 1027 aa
MAHGPFEDKPSIISASSPTPWSAEGERQSRFGRAAAMLAFEEQVVADLVEDPNGGLVVLS
SGFPLASLAAALLLQLHLHHRPGDAAGGGGCLLVLSAPDPLKARILRRLQDRLQVLDVPP
DLPAQQRASLYASGAALFLSPRALAADLLTSRLHPSHVRALLLLSAHRSSDTSSDSFIAR
LLRQRHLLPVYAFSDRPHAMVAGFSKAERAMKSLYVRRLHLWPRFHVLAAADLERAPPDV
VDVRVPMTPAMRGIQAAVLAAMDACLKELRRTNKVDVEDLTVDKGLFKSFDEIVRRQLDP
IWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWILADSSHKI
FELAKRRVYQVVRADGIKVSTDKKGTPTKKRKVAHNSTDKGKEYENEDSTADKHNTQKVN
ADAGIVLDEVLEEAPKWKVLQELLQEIAEEQTKGDGENAQAEDESGIVLVTCKDERTCFQ
LQECISKGPHKVMREEWEKYLLGKAELHGLQKKNKKKSEQPKGFGVLDGEVQMGPSESAG
PVSISKLETNALLAAASELRNVTKEADVKDGSNVSCSKRRLVKEKAKGKSKKTTEKRQAS
NRKNKSKGGNDNDQGTALEVEGQSGKTDEHADIDASKVSTDASVSSSTAGDACNYSSDFR
GLTNGNPLPPVQFHALDGDQHILDVWKPSIIIVYHPDITFVREIEVYKAENPSRKLKVYF
LFYEDSTEVQKFESSIRRENEAFESLIRQKSLMMIPVDQDGRCIGPTLANEPDPLLSQNS
ITRKAGGKKTPEKEMQVIVDMREFMSSLPNVLHQKGIRIVPVTLEVGDYVLSPLICVERK
SIADLFQSFASGRLYNQVDTMARYYKIPVLLIEFSQDKSFSFQSASEIGDDVSPTNIISK
LSLLVLHFPRLRIVWSRSLHATVEIFVSLKTNQDEPDEKKAIRVGVPSEDGIVEDDVRAE
NYNTSAIEFLRRLPGVTDSNYRAIMDGCNSLAELALLPVEELTGLMGSQKGARTLKEFLD
AKCPTML
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggcccacggcccatttgaggacaagcccagcatcatatcggcgtcatcgccgacgccg
tggtccgcggagggagaaaggcaatcgcggtttggcagggcggcggcgatgcttgcgttc
gaggagcaggtggtggcggacctggtggaggaccccaacggcgggctcgtggttctctcc
tcgggcttcccgctcgcctccctcgccgccgccctcctcctccagctacacctgcaccat
cgccccggcgacgcggcggggggaggaggatgcctcctcgtcctctccgccccggacccc
ctcaaggcccggatcctccgccgcctccaagacaggcttcaggtcctcgacgtgcccccc
gacctccccgcccagcagcgcgcctccctttatgcttctggcgccgccctcttcctctcc
ccgcgcgctctcgccgccgacctcctcacctcccgcctccacccctcccacgtccgggcc
ctcctcctcctctccgcccaccgctcctccgatacctcctccgactccttcatcgcccgc
ctcctccgccaacgccatcttctccccgtctacgccttctctgaccgcccccacgccatg
gtagccggcttctccaaggccgagcgtgccatgaagagcctctacgtccggcgtctccac
ctctggccccgcttccacgtcctcgccgccgcagacctggagcgcgctccgcccgacgtg
gtcgacgtccgcgtccccatgacccctgccatgaggggcatccaggccgccgtccttgct
gccatggacgcctgcctcaaggagctcaggcgcaccaacaaggtggatgtcgaggacctc
accgttgacaagggccttttcaagtcattcgacgagatcgtcaggaggcagctcgacccc
atctggcacactctcggcaagaagacaaagcagcttgtggctgacctcaggacgctacgc
aagctgctcgattacctcgtcaggtatgatgcagttacatacttgaagtaccttgacacg
ctgagagtatcagaaggtgttcgatcagtttggatacttgctgactcaagccacaagata
tttgagcttgcaaaaaggcgtgtttaccaggttgtgagagcagacggtataaaagttagc
acagataaaaagggcacaccaacaaagaagaggaaagtggcacacaatagtaccgataag
ggaaaagaatatgaaaacgaggactccactgcagataagcacaacactcagaaggttaat
gctgatgcgggcatcgtattggatgaggttttggaggaggcaccaaaatggaaagtgtta
caggaattgttgcaagagatagcagaagaacagacgaagggagatggtgagaatgcacaa
gctgaagatgaaagtggcatagttttggtaacatgtaaagatgagcgcacatgctttcag
ctgcaagaatgcatatcaaaaggcccccataaggttatgcgagaagagtgggagaagtat
ttgcttgggaaagctgagctgcatggattacagaaaaagaacaagaaaaaatctgagcaa
ccgaaagggtttggtgtcctcgatggggaagttcaaatggggcctagtgagagtgcaggc
cccgttagcattagcaagcttgaaactaatgccttacttgcagctgcttctgaattaaga
aatgtaactaaggaagctgatgtcaaggatggttcaaatgtcagctgcagtaaaaggagg
ttggtaaaggaaaaagcaaagggaaaatcaaagaaaaccactgaaaagagacaagccagc
aatagaaaaaataaaagtaaggggggaaatgacaatgaccaaggtactgctctggaggtg
gaaggtcaatcaggcaaaaccgatgaacatgccgatatcgatgcttccaaggtgtccaca
gatgcttccgtgtcatcctctactgctggcgatgcctgtaattattcatctgatttcaga
ggcttgacaaatggcaatccactacctcctgtgcaatttcatgccctagacggtgaccag
cacatacttgatgtatggaagccatctattatcattgtttaccatccagatataaccttt
gttagagaaattgaagtatacaaggcagaaaacccatcaaggaagttaaaagtttacttt
cttttttatgaagattctaccgaggtgcaaaaatttgaatctagcattcgccgggaaaat
gaagcatttgaatctttgataagacagaagtccctaatgatgatacctgttgatcaggat
ggccgttgtattggaccaactcttgcaaatgagccagatcctcttttgagccagaattca
attacaagaaaggcaggtggtaaaaagacaccagagaaggagatgcaggttattgtagac
atgagagagttcatgagcagtcttcccaatgtactacaccagaaaggtattcgtatagtg
ccggttacccttgaagttggtgactatgttctttctcctctgatctgtgttgaacgaaaa
agtatcgcggacttgttccaaagctttgcttctggtcgtctgtacaatcaggttgatacc
atggcacgttactacaagatcccagttcttcttatagagttttcgcaagataagagtttt
tcctttcagtctgcaagtgagattggggatgatgtctctccgacaaacataatatcgaag
ctttcattgctagtgctgcattttcctcggcttcggatagtctggtcacgcagcttgcat
gctaccgtggaaatatttgtatcacttaaaacaaaccaggatgaacctgatgagaaaaag
gccattagagttggcgtgccatctgaggatgggattgtggaggacgatgtgagggctgaa
aattacaacacgtcagccatcgagttcctaagaaggcttcctggggtgacggattcgaac
tatagagcaatcatggatggatgcaatagcttggccgagcttgccctgcttccagtagaa
gagctgacggggctaatgggcagtcagaaaggagcaaggacgctcaaggagtttctcgat
gccaagtgcccaactatgctgtag

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