Setaria viridis (green foxtail): 117836947
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Entry
117836947 CDS
T07951
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1
KO
K10523
speckle-type POZ protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117836947
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117836947
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
MATH_2
BTB
AtaL
Motif
Other DBs
NCBI-GeneID:
117836947
NCBI-ProteinID:
XP_034572368
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Position
9:11780294..11782311
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AA seq
368 aa
AA seq
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MSTAASTTSGGTPLRSASAIVAVTESGQHLLRIDGYSHTTGIPTGSDIKSSPFRVGGHSW
RISYYPGAQTSSWPYYNCISLSLRLDDDAAKPQGVVRARHSFSLLDREGKPGPYFTNSGN
KTLANWGTPAFIYRSELETSEHLHGDSFTIRCDVTVMKDIQTKSVGAAPAVPPPPDLNRD
LGGLLATGEAADVAFEVDGKAFMAHRCVLMARSPVFRAELSGLQAAAEGSTAGGGSVITV
RIEDMEAQDFEALLRYVYTDSLPEEMEEQGEAAAMLPDLVAAANRYEMERLRLLCEDKLR
KLVDVRTVALMLVFAGEHHCHGLKEACLRFLDDPANLREVVKVNGLEHLSKSCPSVVEDL
IAKLAAAP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggccgcgtccaccaccagcggcggcacgccgctgcggtcggcgtcagccatc
gtcgccgtgaccgagagcggccagcacctgctgaggatcgacggctactcccacaccacg
ggtatccccaccggcagcgacatcaagtcctcacctttccgcgtcggaggccacagctgg
cgcatcagctactaccccggcgcccaaacctcgtcgtggccctactacaactgcatctcc
ctctccctccggctcgacgacgacgctgccaagccccagggcgtcgtcagagcccggcac
tcgttcagcttgctcgatcgcgagggaaagccggggccctacttcaccaacagcgggaac
aaaaccctcgccaactggggcaccccggccttcatctacaggagcgagctcgagacatcc
gagcacctccatggcgacagcttcacgataaggtgcgacgtcacggtcatgaaggatatc
cagacgaagagcgtcggcgcagcaccggcggtgccgccgccgccggacctgaaccgcgac
ctgggcggcctcctcgccaccggggaagccgcggacgtggcgttcgaggtggacggcaag
gctttcatggcgcaccgctgcgtgctcatggcccgatccccggtgttccgcgccgagctc
tccggcctgcaggcggcggccgaggggagcacggccggcggcggctctgtcatcaccgtg
cggatcgaggacatggaagcacaggatttcgaggctttgctccgctacgtgtacaccgac
tcgttgccggaggagatggaagaacaaggggaagcggcggcgatgctcccggacctggtt
gcggcggcgaacaggtacgagatggagaggctaaggctgctctgtgaagacaagctgcgc
aagctcgtggacgtgaggaccgtggcgctcatgctcgtgttcgccggggagcaccattgc
catgggcttaaggaggcgtgcttgcgattcctcgatgatccggcaaatctaagagaggtc
gtgaaggtgaacggcctcgagcatctgagcaagagctgcccctccgttgtggaggacctg
atcgccaagcttgctgcagcaccgtag
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