Setaria viridis (green foxtail): 117836986
Help
Entry
117836986 CDS
T07951
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117836986
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
117836986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
117836986
NCBI-ProteinID:
XP_034572412
LinkDB
All DBs
Position
1:complement(36627355..36639204)
Genome browser
AA seq
1613 aa
AA seq
DB search
MDGGHGPRQPMSPAISASAVVPQQRQMQLHHHPARPAIADLFTLYLGMNSKQRAEDPSRE
SSNKLQKRVTAMNRDLPPRDEQFISDYEQLRMQYPDQDQLQAVTESVLISFVLQCSSHAP
QSEFLLFATRCLCARGHLRWDNLLPSLLNAVSSMEAPMGQGVPVTGGGPVTPSSSAMAMP
NAPNFHPSNPASPLSVMNTIGSPTQSGVDQPVGANVSPIKAAEFSSAAQLSAAARGDQSR
RGAEIGYLHLLSCRIILAGLESNLKPATHAVIFQHMVNWLVNWDQRPHSMDEADAMQTWR
MEKPLHEWMHLCLDVIWILVNEEKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRR
DMVCMHMQMLDQHLHCPTFATHRFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDL
ANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMI
GEAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQ
ILRSNHVTWLLAQIIRIEIVMNSLSSDPRKVETTRKIISFHKEDKSLDANNIGPQSILLD
FISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFTNLDERATGM
FWVLSFTMAQPACEAVMNWFTSAGMADLIQGPNMQPNERIMMMRETYPLSMSLLSGLAIN
LCMKLAFQLEETIFLGQAVPSIAMVETYVRLLLIAPHSLFRPHFTTLTQRSPSILSKSGV
SLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSL
KDFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHT
WSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLS
HSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQFEV
QRGHLAQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYALRIVISLLEKPELQQ
RVKAFCSSRSPEHWLKNQHPKRVELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYR
LIENDATDIADRVLAFYSSLLAFHPLRFTFVRDILAYFYGHLPIKLIGRILNLLGVSTKT
PFSESFAKYLVSSNSSVCPPPEYFANLLLNLVNNVIPPLSSKSKSNPADTTRSTFNKHHA
SSQAGGIGNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVSAAQIVSSLVQIIAHVQA
MLIQSNSGQGMSGGLGQSSGLPTSPSGGGAESAGPNQANSAASGINATNFVSRSGYSSQQ
LSVLMIQACGLLLAQLPPEFHMQLYSEAARVIKDCWWLADSSRPVKELDSAVGYALLDPT
WASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLL
PRLAFARPLFMKTLALLFNVLGDVFGKNSQVPNPVDASEITDIIDFLHHAVMYEGQGGPV
QSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKTDPNCSIYAATHPKLVQNTS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggacggggggcacgggccgaggcagccgatgtctccggccatctcggcctcggcggtg
gtgccgcagcagcggcagatgcagctccaccaccacccggcgcggccggcaatcgccgat
ctcttcaccctttacctcggcatgaactcgaagcagagagcggaggacccatcgagagag
agctcgaacaagctgcagaagagagtgacagctatgaacagagatctgcctccccgtgat
gagcagttcatttcagattatgagcagctgcgcatgcagtaccctgaccaggaccagttg
caggcagtcacagaatcagttctgatctcctttgtcctgcagtgtagtagccacgcacca
caatctgagttcttgctctttgctacacggtgcttatgtgctcgaggccaccttagatgg
gacaacctccttccatctctgcttaatgctgtttcctccatggaggcgcctatggggcaa
ggagttcctgtgactggtggtggccctgtaactccatcttcatcagctatggctatgcca
aatgctccaaacttccacccttcaaatccagcttcacctttgtcagtaatgaacaccatt
ggatctcctactcaatctggtgttgaccaaccagtaggtgcaaatgtgtcaccaattaag
gcagctgaattctccagcgcagctcagcttagtgcagcagcaagaggtgaccagtctcgc
aggggagcagaaattggctatctgcatcttctgtcctgtaggataattctggcagggctg
gagtccaatttgaaaccagctactcatgctgtgattttccagcatatggtaaattggctg
gttaactgggaccagaggccgcacagcatggacgaagctgatgcaatgcaaacttggagg
atggaaaaacctttacatgaatggatgcatctatgcttggatgttatatggattttagtt
aatgaagagaaatgccgcattccattctatgagcttgtacgctgcaacttgcagtttctt
gaaaacattcctgatgatgaagcattagttagtataatcatggagatccataggaggagg
gacatggtttgcatgcacatgcaaatgttagatcaacaccttcattgtccaacatttgca
actcatcgtttcttatcacaatcctacccaagcatagctggtgaatctgttactaatctg
cgttattctcccattacataccctagtgtattgggagagccactacatggagaggatctt
gcaaactccattcctaagggtggtttagactgggaacgtgctcttcgttgcttgaggcat
gctctccgcacaaccccatcaccagactggtggagacgtgttcttctcgttgccccttgt
tacagatcacagtctcaacaatcatcaactcctggagctgttttctctcctgatatgatt
ggtgaggcagttgctgacaggacaatcgaactcttgaggcttactaactcagagactcag
tgctggcaagattggcttttgtttgctgacatctttttcttcctaatgaaaagtggatgc
attgacttccttgattttgtggataagcttgcttctcgagtgacaaatagtgaccaacag
attctgcggagtaatcatgtcacttggctgcttgcacagattatccgcattgagatagtg
atgaatagtcttagttcagacccaaggaaggttgaaactacaagaaagataatttcattc
cacaaagaagacaagagccttgatgccaataatattggccctcaaagtattcttcttgat
ttcattagtagcagtcagactctgcgcatttggtctttcaatacttcaatcagagagcat
ttgaacagtgatcagcttcagaaaggaaaacaaatagatgagtggtggaaacagatgaca
aaagcttctggcgagagaatgatagactttacgaacttggatgaacgggcaacggggatg
ttctgggttctctccttcactatggcgcagccagcttgtgaagcagtaatgaactggttt
acgtcagctggaatggcagatttaattcaggggcctaatatgcagccaaatgaaagaata
atgatgatgcgtgaaacatatcctctgtcaatgtcattgctttctgggttggctattaat
ctttgtatgaagcttgctttccagcttgaagagaccatatttctcggccaggctgtacct
agcattgcaatggtggaaacctatgtgagattactgcttatagcgcctcattcattgttc
cgtccccattttacgacattaacccaaagatctccgtctattctgagcaaatctggtgtc
tctttgctcctacttgagatactgaattacaggctacttcctctatataggtatcatgga
aaaagcaaggcattgatgtatgatgttacaaagataatatcaatgattaagggtaaacgt
ggagagcatcgtcttttcagattagctgaaaatttgtgcatgaatttgattctctcgctg
aaagacttcttttttgtgaaaaaagaactgaaggggccaactgagtttactgaaactctt
aaccgcataacgataataagtctcgctatcaccatcaagacacgtggaattgctgaggtt
gaacacatgatttatcttcaaccattgctagagcaaattatggcaaccagtcagcatacc
tggtcggaaaagacgctacgttattttcctcctcttattcgtgattttttaatggggaga
atggataagaggggccaagctattcaagcatggcagcaggcagaaacaactgtcattaac
caatgcaatcagctgctctcaccatctgctgagccaaactatgtcatgacttatttgagc
cacagtttccctcagcatcgtcaatacctttgtgctggtgcttggatgctgatgaatgga
catcttgaaatcaacagtgcaaatcttgctcgtgtcttaagggagttttcacctgaggaa
gttacagcaaatatctatacaatggttgatgttcttctgcatcatatccaatttgaggtg
caaagaggccatctagcacaggacttactatccaaagcaatcacaaatctttctttcttt
atatggacacatgagcttcttccactggatattctactgctagctcttattgacagggat
gatgatccttatgctttacgcattgtgataagtctgcttgaaaagccagaacttcagcaa
agagtcaaggcattctgcagttctcgttccccagagcattggctcaaaaatcaacatcct
aaaagagttgagctccagaaagctcttggtaaccatttatcatggaaggaccgttatccc
ccgttcttcgatgacattgctgcgcgcttgcttcctgttatcccgctgattatttatagg
cttattgagaatgatgctacagatattgcagacagagttcttgcattttattcttccttg
cttgccttccacccgctaaggtttacatttgtacgtgatattcttgcatatttctatggt
catcttccaatcaaactgattggtaggatcctcaacttgcttggtgttagcactaagact
cccttctcagagtcttttgctaaatatttagtgtcatctaattcatcagtttgtccacca
ccggaatactttgccaaccttttgctaaacctggtcaataatgtcatacctcctttaagt
agcaaatccaaatcaaacccagcagacacaacacgctcgactttcaacaagcatcatgcg
tcttcacaagctggtggaatcggtaacactgatggtcagagggcattttatcagaatcaa
gatcctgggtcatatacacagcttgttttggaaacagcagctattgagattctctcactt
cccgtctctgctgctcaaatagtgtcctctttagttcaaataatagctcatgtacaagca
atgcttatacagtcaaatagtggccaaggaatgtcaggtggtttggggcaaagttctggg
ctgccaacttctccttcaggtggaggtgctgaatctgcaggtcccaaccaagcaaacagt
gctgcaagtgggatcaatgccactaactttgtttctaggagtggctactcctcccaacaa
ttgtctgttttaatgattcaagcatgtggtcttttgctggcacaactcccaccagaattt
cacatgcaactatactcagaagcagcccgtgtcataaaagattgctggtggctagctgat
agttcgaggcctgttaaagagcttgactctgctgttggctatgcactgctggatcctaca
tgggcttctcaagacaacacatcaacagccataggtaacattgtcgcccttctgcactca
ttctttagcaatcttccacaagaatggctggaatctacccatactgtcataaaacacctt
cggccagttaattcagttgccatgttaaggatcgccttccgcatattgggtcccttgtta
cctcgtctagcctttgctcgacctttgttcatgaagaccttggctttactgttcaatgtt
ttgggtgatgtatttggtaagaactctcaggtcccgaatcctgtggacgcttcagaaatt
acagacataattgacttcttgcatcatgctgtgatgtatgaaggccaagggggtcccgtt
cagagcactagcaaacctaagctggagatactgacattatgcgggaaagttatagaaatt
ttgaggccagacgtgcaacatctcctctcgcacctgaagactgatcccaactgctcaata
tatgcagcgacgcatccaaagctcgtgcaaaacacatcctaa
DBGET
integrated database retrieval system
