Setaria viridis (green foxtail): 117837062
Help
Entry
117837062 CDS
T07951
Name
(RefSeq) presenilin-like protein At2g29900
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117837062
Peptidases and inhibitors [BR:
svs01002
]
Aspartic peptidases
Family A22: presenilin family
117837062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
117837062
NCBI-ProteinID:
XP_034572520
LinkDB
All DBs
Position
9:complement(11562409..11564090)
Genome browser
AA seq
456 aa
AA seq
DB search
MADAAAAVPGDPPAGATVLDSLGEDITRIVYPVSACMLLVVLLVSLLSSPSSPSPLTASI
AAATGGGGGVSGGVGDDIPTALVTALTFVVAVTAATFLLALLFYLRCTPCLRAYLGFSAL
AVLFVLGGQVALLLLSRLRFPLDAVSFALLLPNAAGALALAALAPASVPIALHQAALVAV
AVLTAFWFTLLPEWTTWALLVAMAIYDLAAVLLPGGPLRVLLELAIERNEEIPALVYEAR
PVDPRHGRNWRLWREGRQPGADLDASSTTVDVTGEVSGRRLDANSGNSSAPQVHEATISA
GNVNNSRPRETLAAALSSDSTVEQAGEVSALREHRVAVAEMRVPLIQPRPERSGEEEEDE
DGIGLSSSGAIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITLLLLAFFRKA
LPALPVSIALGVVFYVLTRTLLEEFVVQCSTNLLMF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcggcggccgccgtccctggcgatccaccggccggcgccaccgtgctggac
tcgctcggcgaggacatcacccgcatcgtctaccccgtctccgcctgcatgctcctcgtc
gtcctcctcgtctccctcctctcctcgccctcctccccctcgcccctcaccgcctccatc
gccgccgccaccggcggcggcggcggcgtctccggcggagtgggggacgacatccccacc
gcgctcgtcaccgccctcaccttcgtcgttgccgtcacggccgccaccttcctgctcgcg
ctcctcttctacctccgctgcacgccctgcctccgcgcctacctcggcttctccgcgctc
gccgtcctgttcgtcctcggcggccaggtcgcgctgctcctcctctcgcgcctccgcttc
ccgctcgacgccgtctccttcgcgctcctcctccccaacgccgcgggggcgctcgcgctc
gccgcgctggccccggcatccgtccccatcgcgctccaccaggccgcgctcgtcgccgtc
gccgtcctcaccgccttctggttcacgctgctccccgagtggaccacctgggcgctgctc
gtcgccatggccatctacgacctcgccgccgtgctgcttcctggtggccctctgagagta
ctgcttgagctcgccatagagaggaacgaggagataccggcgctggtctacgaggcgagg
ccggtggatccccgacacggccgaaattggcgcttgtggagggaagggaggcaacctggt
gcggatttggatgccagttccaccacggtcgacgtgactggggaggtatccgggaggcgt
cttgatgccaattccggaaacagttcggcaccccaagttcatgaagctaccatttcagct
ggtaatgttaataattcaaggcccagggagacattggcggctgctttgagctcagattct
acagttgaacaagctggggaggtatccgcattgcgggagcatagagtggctgttgctgaa
atgagggtacctttgatccagccacgtccagagagatcaggggaagaggaggaagatgaa
gatggcattgggttgagctcatctggggcgatcaagctcggcttgggggacttcatattc
tacagtgttctggtcggtagggcagcgatgtatgactacatgacagtgtacgcctgctac
cttgccatcattgctgggcttggcatcactctgctcctgctggccttcttccgcaaggca
ttgcctgccctacccgtgtccatcgcccttggcgttgtgttttatgtgctcacaagaaca
ttgcttgaggaatttgttgtgcagtgctccaccaatcttttgatgttttag
DBGET
integrated database retrieval system
