Setaria viridis (green foxtail): 117837110
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Entry
117837110 CDS
T07951
Name
(RefSeq) polygalacturonase ADPG2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00040
Pentose and glucuronate interconversions
svs01100
Metabolic pathways
Module
svs_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117837110
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117837110
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
117837110
NCBI-ProteinID:
XP_034572587
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Position
9:complement(2488169..2490358)
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AA seq
548 aa
AA seq
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MLSTWAWRDATVTCKLQNTMCQPNSPALLFFASNATTSTSPPGFHSSSSRALNRGYGRAP
SLVTSIHQTNTKLSLPMASRLVLVFLAPLLALLFVSGALQAAAASTNGTASTEFSLDRAG
GSVLAALPAVARLLARLLVPGTLEVEDGAAAGIWDTSSLLGSSVFSLDRYGARGDGRHDD
TRALAMAWRAACASRRPAVVLVPRGRRYLLKVITLHGPCRSSVAVAVKGTLVASPNRDDW
SEKERRHWIVFRRVDRLTVDGGGAVDGNGETWWKHSCKINPDLPCKGAPTALSFHLCKNL
RVEDLKIVNSQQIHVSVEDCTNVQLARLSITAPHSSPNTDGIHITRSKDVKVTNCKIRTG
DDCVSIEDGTHNLHVSKVVCGPGHGISIGSLGDHSSWAQVSGITIDTVQLYGTTNGARIK
TYQGGSGYAKDITFQNMIMHDVDNPIIIDQNYCDKATPCEEQRSAVEVSNVVFKNIRGTT
MTKDAIKLNCSMSVPCHGITLQNIDLRMHSGMGNTVSTCQNAKWRKYGTVRPQPCTAKTY
EILELSSI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcacatgggcatggcgcgatgcaacggtcacctgcaaactccaaaacacaatg
tgccaacctaactctcccgcgttactcttcttcgcaagcaacgcaaccacctcaacctcg
cctccaggattccatagctccagctcccgcgcgttaaatagaggctatgggcgtgctcct
tccttggtcaccagcatccaccaaaccaacaccaagctctctctgcccatggcgtcgcgt
cttgtgctcgtgttcctggcgcccctcctcgcgctgctcttcgtctccggcgctctacag
gctgctgcggcctcgaccaatggcactgcctcgaccgagttcagcctcgaccgcgccggc
ggcagcgtactcgcagctctgccagcggtggcgcgtctcctcgcgcggctcctcgtgccc
ggcactctagaggtcgaagacggagccgccgccgggatctgggacacgtcgtcgctgctg
ggctccagcgtgttcagcctcgaccgctacggcgcgcgcggcgacgggcggcacgacgac
acccgcgcgctggccatggcgtggcgggcggcgtgcgcctcgcgtcggccggccgtcgtg
ctcgtcccccgcggcaggcgctacctgctcaaggtcatcaccctccacggcccctgcagg
tccagcgtcgcggtcgcggtgaagggcacgctggtggcgtcgccgaacagggacgactgg
agcgagaaggagaggaggcactggatcgtgttccggcgcgtcgacaggctcaccgtcgac
ggcggcggcgccgtcgacggcaacggcgagacgtggtggaagcactcgtgcaagataaac
ccggatctgccatgcaagggggctccgactgctttgtcgttccacttgtgcaagaatttg
agggtggaggatctgaaaatcgtcaacagccaacaaatccacgtgtcggtcgaggactgc
accaatgtgcaactggcacgtctgtccatcactgctcctcactccagtcctaacactgac
ggcatccacatcactcgcagcaaagatgtgaaggtcaccaactgcaagatcaggactgga
gatgattgcgtgtcaattgaggacgggactcacaatcttcatgtctcgaaagttgtgtgc
ggaccgggccacgggatcagcatcggaagccttggagatcacagctcatgggctcaagtc
tctggcattaccatagacacggtgcagttatacggcacaaccaatggagcacgcatcaag
acataccagggaggaagtggttacgctaaggatatcacattccaaaacatgatcatgcac
gatgtcgacaacccgataatcatcgatcagaactactgcgacaaggctactccatgcgaa
gaacagagatcggcagtggaggttagcaatgtggtcttcaagaacatcagagggacaacc
atgaccaaggatgccattaagctgaactgcagcatgagtgtcccatgccatggcattacc
ttgcagaacattgacctgagaatgcatagcggcatgggcaacacagtaagcacgtgccag
aatgcaaaatggaggaaatatgggaccgtccgcccacagccctgcactgccaaaacctat
gaaatattggaattgagcagcatttaa
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