Setaria viridis (green foxtail): 117837226
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Entry
117837226 CDS
T07951
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117837226
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svs01001
]
117837226
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117837226
03029 Mitochondrial biogenesis [BR:
svs03029
]
117837226
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117837226
Protein kinases [BR:
svs01001
]
Serine/threonine kinases: Other
ULK family [OT]
117837226
Membrane trafficking [BR:
svs04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
117837226
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117837226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ABC1
ATG1-like_MIT2
Kdo
Pkinase_fungal
YrbL-PhoP_reg
Pox_ser-thr_kin
Motif
Other DBs
NCBI-GeneID:
117837226
NCBI-ProteinID:
XP_034572703
LinkDB
All DBs
Position
9:complement(48211315..48218284)
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AA seq
702 aa
AA seq
DB search
MGDGASGRGGGGGGGRRVGEYELLRPIGSGAYSQVWLGRHRARGAEVAVKEIAMERLSSK
LRESLLSEVDILRRIRHPNVIALHDSIKDHGRIYLILEYCRGGDLHGYLQRHKRVSETVA
KHFIRQLASGLQMLRDNNVVHRDLKPQNILLVENNENSLLKIADFGFAKFLQPFALAETL
CGSPLYMAPEVMQAQKYDAKADLWSVGVILYQLVTGIPPFNGDNQIQLLKNILRSREIQF
PSDCELSHGCIDLCRKLLRLNSVERLTVEEFVHHPFLSEHAPERTLSRSPSDIRDLPSSQ
SSQEDCMPFPLDDESSGQDESPVPESKSPMKSYGFPVGKRLDKTSGQSPSKHVGLFSRYV
LGNNHAPSSQHHDHAGKKTKEGNVDQVQGRKGGYPEDSPMIDSLEFVDQEYVFVSGPEGS
SSSTNASRQQNLPTKYDNSSVSPPKLTLLSSPMPINGLPINRQQSAGTGSLDSHCSPASG
TSQGSADMSDAMDQPPSDHPARIRLLEQYASAISFLVKDEIKAGRHLEAFSIQLIVLATW
KQAIHLCNTFVASTARDSPSQDIPMKGLSADAPHLLGNSQLADDACMQIERQFLSDVEYA
EGLASTVGQIADGTEMPDAIEIIFQSALHIGRRGGVDEMFGKAADAMTGYTRAVSMLRFL
LIEAPSLALNPPLTLTRSDRHRLRTYIEALNTRLGQMRSQRH
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggcgcgagcggccgtggcggcggaggcgggggcgggcggcgggtgggggag
tacgagctgctgcggccgatcgggtcgggggcgtactcgcaggtgtggctggggcggcac
cgggcgcggggcgcggaggtggcggtgaaggagatcgccatggagcggctcagcagcaag
ctccgcgagagcctcctctccgaggtcgacatcctccgccgcatccggcaccccaacgtc
atcgcgctccacgactccatcaaggatcatgggaggatatatctcatattggagtattgt
cgaggtggtgacttacatggataccttcaacgtcataaaagagtttctgaaacagtcgcg
aagcatttcatccgtcagctggcatctggtctgcaaatgcttcgtgacaataacgtggtt
catcgagacctaaaacctcagaacattcttcttgttgaaaataatgaaaattctctgttg
aagattgccgactttggatttgcaaagtttctgcaaccatttgcccttgctgaaacactc
tgtggttcaccactttacatggctccagaagtcatgcaagcacagaagtatgatgcaaag
gcagatctatggagtgttggtgtcattctatatcaacttgttactggaattccacctttt
aatggggataatcagatccagctgcttaaaaatatactcaggtcacgtgaaatacaattc
ccatctgattgtgagttgagccatggttgcattgacttgtgcagaaaattgctgcggctc
aattcagtggagcggcttacagttgaagagtttgtgcaccacccatttctttctgaacat
gctccggagagaaccttgagccggtctccatctgacataagagatttgccttcaagccaa
agttctcaagaagattgtatgcctttccctttggatgatgagtcaagtggacaggatgag
agtccagtacctgaaagtaagagtccgatgaaatcttatgggttccctgtgggtaaaaga
ttggataaaacttcaggccagagtccatcgaagcatgttggtcttttctccagatatgtc
ttgggtaataatcatgcacctagtagccaacaccacgaccatgctggtaagaagacaaag
gaaggcaatgttgatcaagtacaaggtcgtaaaggtggctatccagaagattcccctatg
attgattcattagagtttgtagatcaggaatatgtctttgtgtctggaccagagggatca
tcttcttcaacaaatgcctctcgacagcaaaacttgccaacaaaatatgataattcgtct
gtttcgccacctaagttaactttattgagttcaccaatgccaataaatggtttgccgatt
aatagacaacagtctgctgggactggtagcttggatagccactgttctccagcatctggc
acctcacaaggatccgcagatatgagtgatgccatggatcagcccccatctgatcatccg
gcaaggattagactattggagcagtatgcatcagccatatcgtttttggtcaaagatgag
atcaaagctggcagacacttggaggcgttctctattcagctaattgttcttgcaacctgg
aagcaagcaattcatttatgcaatacatttgtagcttcaactgcaagagattctccttcc
caggatatccctatgaaggggctaagtgctgatgctccccatttgctcggaaactctcaa
ctggctgatgatgcctgcatgcagatagagagacagtttcttagtgatgttgaatatgct
gaaggactagccagcactgtaggacagatagctgatggtacagagatgcctgatgcgatc
gaaataatatttcagtctgccttgcatataggaaggcgtggtggtgttgatgagatgttc
gggaaagcagcagatgccatgaccgggtatacgagggctgtatccatgctgcggtttctc
ctgatcgaggcaccatcacttgccctcaatccccctttgactctgacaagatccgatcgg
catcggctgcgaacatacattgaagctctcaacaccaggcttggccagatgcggagccag
aggcactaa
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