Setaria viridis (green foxtail): 117837251
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Entry
117837251 CDS
T07951
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117837251
Enzymes [BR:
svs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
117837251
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117837251
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
RrnaAD
Motif
Other DBs
NCBI-GeneID:
117837251
NCBI-ProteinID:
XP_034572735
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Position
9:complement(1210552..1213615)
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AA seq
456 aa
AA seq
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MGRAPANGKRSPPPPPPPGRCHFWLPNKRRHCANSPLPSSQYCGNHLPESASGAGRRVPC
PVDPSHTVLEENLEEHVGKCPLKKQVAALAAQPYYSKGINSGGSEAGRGITSAEKRAAVY
RLTDDEFRGLLGKIRSVHAAAAVAMRESYLITDACDKWMSGQVDRKVPYQEKHVAQQASI
VGNMEAFGLLRKGGADVVGGENVAVSAQAVMEFGAGRGYLTQVLVDCYGIRNVFLVERRS
YKLKADRSLRQNEDVTLERLRIDIEDLNLHGIEALRGLKYLAIGKHLCGPATDMTMTCCL
PEQYDQTEERVHGKHSLQGLALATCCHHLCQWKHYANKSFLSGLDITEEEFHAITWFSSW
AVDGDHSSPGSYAEVEDTSSEVREPEKPDPEIIGIERIIRSIPTGERASLGFMCKDIIDT
GRLLWLRHKGLVADLVSYVPSNISPENRLLIAKCTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtgcaccggcgaacggcaagcgctcaccaccaccgcctcctcctccaggccgt
tgccacttctggctccccaacaagcgccgccactgcgccaactcccccctcccgtcctct
cagtattgcgggaaccacctacccgagtccgcttctggcgccggccgccgcgtgccctgc
cccgtcgacccctcccacacggtgcttgaggagaacctggaggagcacgtcggcaagtgc
cccctgaagaagcaggtcgccgcactcgccgcgcagccgtactactccaagggcatcaac
tccggcgggtccgaggccggccgcggcatcacgtcggcggagaagcgtgcggccgtatac
aggcttacggacgatgagttccggggtctgcttggtaagatccggtcggtgcacgccgcg
gcagccgtggcgatgcgcgagtcctatctcatcaccgatgcttgcgacaaatggatgagc
gggcaggtcgataggaaggtgccataccaagagaagcatgtcgcgcagcaggcatccatt
gttggaaacatggaggcatttggcttgttgcggaagggtggcgctgatgtggtgggtggg
gagaatgtggcagtgagtgctcaggcggttatggaatttggagctggaagagggtacttg
actcaggtgctcgtggactgttacgggattaggaatgtgtttttggttgagagacggtcc
tacaagcttaaggctgatcgaagcttgcgtcaaaatgaagatgttaccttggagcgttta
agaattgatattgaggatttgaacctacatggaatagaggcattgaggggacttaagtat
ctagcaattggaaaacatctttgtggacctgcaacagatatgaccatgacttgctgtctc
cctgaacaatatgaccaaacagaagaaagggtccatggcaaacatagtcttcagggcctt
gctctagctacctgctgccaccatctttgtcaatggaagcattatgcaaataaatctttc
ctctcaggactagatattacagaggaagaattccatgccataacatggtttagcagttgg
gctgtcgatggtgatcacagctccccaggttcctatgcggaggttgaagacacgtcttct
gaagtcagagaaccagagaagcctgatccagagatcatcggaattgagagaataatccga
agtataccaacaggggagagggcctctctaggattcatgtgtaaagacatcattgatacc
gggaggctgttatggcttagacataagggtctagttgcagatcttgtaagctatgttcca
tcaaatatttcaccagagaaccgtctactaatcgcaaagtgcacatcttga
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