Setaria viridis (green foxtail): 117837312
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Entry
117837312 CDS
T07951
Name
(RefSeq) heat shock cognate 70 kDa protein 2
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
svs04141
Protein processing in endoplasmic reticulum
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117837312
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117837312
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117837312
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117837312
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117837312
03009 Ribosome biogenesis [BR:
svs03009
]
117837312
03110 Chaperones and folding catalysts [BR:
svs03110
]
117837312
04131 Membrane trafficking [BR:
svs04131
]
117837312
03051 Proteasome [BR:
svs03051
]
117837312
03029 Mitochondrial biogenesis [BR:
svs03029
]
117837312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117837312
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
117837312
Spliceosome [BR:
svs03041
]
Complex B
Other components
Prp19 complex
117837312
Complex C
Prp19-CDC5 complex
117837312
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117837312
Chaperones and folding catalysts [BR:
svs03110
]
Heat shock proteins
HSP70 / DNAK
117837312
Membrane trafficking [BR:
svs04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
117837312
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
117837312
Proteasome [BR:
svs03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
117837312
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
117837312
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117837312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
117837312
NCBI-ProteinID:
XP_034572808
LinkDB
All DBs
Position
9:complement(1823082..1826940)
Genome browser
AA seq
648 aa
AA seq
DB search
MAPTKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAK
NQVAMNPINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFS
AEEISSMVLIKMREIAEAYLGLTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINE
PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRLVNHFVQEFKRKNKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDF
YSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVL
IPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQDAEKYKSEDEEHK
KKVEAKNSLENYAYNMRNTIQDEKIASKLPADDKKKIEDAVEQAIQWLDSNQLAEVEEFE
DKMKELEGLCNPIIAKMYQGAGADMAGGMEDDAPAAPGGAGPKIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccaagggcgaggggccggcgatcggcatcgacctgggcaccacgtactcg
tgcgtcggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgaccaggggaaccgt
accacgccgtcgtacgttgggttcaccgactccgagcgcctcatcggcgatgccgcgaag
aaccaggtcgccatgaaccccatcaacaccgtctttgatgctaagcgtcttatcggcaga
cggttttctgatgcttctgtccagagtgacattaagatgtggccgtacaaggttattcct
ggcccaggggataagcctatgattgtagtgcagtacaagggtgaggagaagcagttctct
gccgaagaaatttcttctatggttcttatcaagatgcgtgagattgctgaagcttacctt
ggattgaccataaagaatgctgtggttactgttcctgcttactttaatgattcccagagg
caggcaactaaggatgctggtgttattgccgggctcaatgtcatgcgtatcatcaatgag
ccaactgctgctgcaattgcctatggtcttgacaagaaagctactagtgttggtgagaag
aatgtccttatttttgaccttggtggtggcacttttgatgtttctctcctcactattgag
gagggtatatttgaggtgaaggccacagctggtgacactcaccttggtggggaggacttt
gacaaccgcttggtgaaccactttgtccaagagtttaagcggaaaaacaagaaggatatc
actgggaaccccagggctttgagaaggcttaggacttcatgtgagagggctaagaggaca
ctttcttccacagcgcagactacgattgaaattgattctctctacgagggcattgatttc
tattccaccatcacaagagccaggtttgaggaacttaacatggacctattcaggaagtgc
atggagcctgtggagaagtgcctgagggatgccaagatggataagagcactgtccatgat
gttgtccttgttggtggttcgactaggatccccaaagtccagcagctgctgcaggacttc
ttcaatggaaaggaactttgcaagagcatcaatcctgatgaagctgttgcctatggcgct
gccgttcaggctgctatccttagtggtgagggcaatgagaaggttcaggaccttctcctc
ctcgatgtgaccccactgtctcttggtcttgaaactgccggaggagtcatgactgtcctt
attccaaggaacaccaccattccaaccaagaaagagcaggtcttctccacctactcggat
aaccagcctggtgtgttgatccaggtttatgagggcgagaggacccggaccagggacaac
aatctccttgggaaatttgagctctctggaatcccccctgctcctaggggtgtccctcag
atcactgtatgctttgacatcgatgctaatggtattctgaatgtctctgctgaagacaag
acgactggacagaagaacaagatcaccatcaccaatgacaagggaaggctgagcaaggag
gacattgagaagatggtccaggatgcggagaagtacaagtctgaggatgaggagcacaag
aagaaggttgaggccaagaactccctggagaactatgcctacaacatgaggaacaccatc
caggatgaaaagattgcttccaagctgccagcagatgacaagaagaagattgaggatgct
gtcgagcaggcgatccagtggctggacagcaaccagcttgctgaggtcgaagagttcgag
gacaagatgaaggagctcgaaggcctctgcaaccccatcatcgccaagatgtaccagggc
gctggagctgacatggctggtggtatggaggatgatgctcctgctgctcctggtggtgct
ggccccaagattgaggaagtcgactaa
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