Setaria viridis (green foxtail): 117837356
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Entry
117837356 CDS
T07951
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117837356
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
117837356
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117837356
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
117837356
NCBI-ProteinID:
XP_034572856
LinkDB
All DBs
Position
9:52864111..52867973
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AA seq
457 aa
AA seq
DB search
MARSRPRVWLLAACAAVLLWASVAQLVAVGRLLLVFGIAGDADPSPPPSVLPPPRIYKSN
GYLKISCNGGLNQMRSEICDMVAVARLLNLTMVVPELDKRSFWADQSNFGDIFDVRHFID
SLRDEVHIIKQLPERLDPGDSDVILQMPPVSWSDEKYYLHQILPLFSKYSALHFNKTDAR
LANNGISTELQLLRCRVNFHALKFTRQIEGLGNKLVHKLRAKGSFVALHLRYEMDMLAFS
GCNHGLSSEEAEELKKMRYAYPWWRDKEIDSQAKRSQGLCPLTPEETSLVLKALGFQKDA
LIYIAAGEIYGGDRRLEPLRAAFPKLVRKEMLLDSEVLRQFQNHSSQMAALDFIVSTASD
VFIPTFDGNMAKLVEGHRRFLGFRRSVVLDRRKLVELLDLYTNKAISWDNFASSVQETHK
SRVAQPSCRQKLENRPKEEDYFYANPHECLANSSLCS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggtcgaggcctagggtttggctcctggcggcctgcgccgccgtgctgctgtgg
gcctccgtcgcgcagctcgtcgccgtcggccgcctcctcctcgtgttcggcatcgcgggc
gacgccgatccttcgccgccgccgtccgtgcttccgcccccaagaatatacaagagcaat
ggttatctcaagatatcttgtaatgggggtctgaatcagatgcgatcagagatttgtgac
atggtagcagttgctcgtctgctaaacctcacaatggttgtcccggaacttgacaagaga
tcattctgggctgatcaaagcaattttggagatatatttgatgtgaggcatttcattgac
tcattaagagatgaagtgcacatcattaaacagcttccagagaggcttgatccaggagat
tcggatgttatacttcaaatgccacctgtgagctggtcagatgaaaaatattacttgcat
cagatcttaccactgttcagcaaatacagtgctctccattttaacaaaacagatgctcgg
ttagccaataacggtatcagtacagagcttcaactgcttagatgccgtgttaattttcat
gcactgaaattcacccgtcaaattgagggattggggaataaacttgtacataaacttcga
gctaagggatcatttgtagccttgcatttacgctatgagatggatatgctggccttttct
ggttgcaaccatggcctttcatctgaagaagctgaggagctaaaaaaaatgagatatgct
tatccatggtggagagacaaagaaattgattcccaagcgaagaggtcacaaggactatgc
ccacttactcctgaggagacatcacttgttttgaaagccctgggatttcaaaaggatgct
cttatatacattgctgctggtgaaatttatgggggagataggagattagaaccactccga
gctgctttccctaaacttgtaagaaaagagatgctgctagactctgaagttctgcgtcaa
ttccaaaatcactcttcccagatggctgcacttgatttcattgtttccacagccagtgat
gtattcattcccacttttgatggtaacatggcaaaacttgttgaaggccaccggaggttc
ctgggtttccggagaagtgtggtgctagaccgacggaaattagttgaacttctagacctg
tacaccaacaaggcaatctcttgggacaattttgcatcttctgttcaggaaactcataag
agccgtgtagcccaaccatcctgcaggcaaaaacttgagaacagaccgaaagaagaggat
tacttctacgctaacccccacgaatgcctggccaattcaagcttgtgcagctaa
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