Setaria viridis (green foxtail): 117837371
Help
Entry
117837371 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117837371
Spliceosome [BR:
svs03041
]
Common components
Common spliceosomal components
General mRNP proteins
117837371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117837371
NCBI-ProteinID:
XP_034572875
LinkDB
All DBs
Position
9:53545680..53559243
Genome browser
AA seq
550 aa
AA seq
DB search
MDFDEYEYLEKTVEASGVPSNGAAAPGSGEKEKDKERSSRRRSSGGDEERDDVERRSKRS
RSEEGRDRDKERHRDRHRDRDRHRSSRERRDRDRDDKEKERERDKDRRSRDRDREREKEK
EKEKERERGREKDRQRRSRSRSERRRDDEERDRYRDRDVRRRKEEAAEPEVDPERDQRTV
FAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSG
QLLLGQQVMVKPSEAEKNLVQSTASSSGAASGGARKLYVGNLHSNINEEQLRQVFEPFGQ
VELVQLPLDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQAGMQVS
GATTGDLDDDEGGGLALNASSRALLMQKLDRSGITTSLAGGMGTASLNTPVGIPAVSVLG
AAPATAPVLHPTVPGLGSIPGATLPISTPSIELAPPSECLLLKNMFDPAVETDPDFDLDI
RDDVQDECSKFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMT
PQQYEMKFPS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtaccttgagaagacggtggaagcgtccggggtgccgtcc
aacggcgccgcggcccccgggtcgggggagaaggagaaggacaaggagcgcagctcccgc
cgccgctcctcgggcggcgacgaagagcgcgacgacgtcgagcgcagatctaagcgttct
cgctccgaggaaggccgcgaccgcgacaaggagcggcaccgggatcggcaccgggaccgc
gaccggcaccgcagcagtcgggagcggcgagaccgggatcgcgacgacaaggagaaagag
cgggagagggacaaggacaggaggagccgtgatcgcgatcgcgaacgggagaaggagaag
gagaaggagaaggagagggagcgggggagggagaaggataggcagcggaggagccggagc
cggtcggagcggcggcgtgatgacgaagagcgtgaccgctaccgtgaccgcgatgtcaga
cgtaggaaagaggaggctgcggaacctgaagttgatcctgaaagagatcagagaactgtg
tttgcttaccagttatctttgaaggcagatgaaagagacgtgtacgagttcttttctagg
gctggaaaggtccgggatgttcgcctcattatggatcgaaattcacgtcgttctaaagga
gttgggtacattgaattctacgacgctatgtctgttccaatggcgatagctctttctggt
cagctgcttcttggtcaacaagtaatggttaagccttcagaggctgaaaagaatttagtc
cagtcaactgcttcttcaagtggagccgcttcaggtggagcaaggaagttgtatgttgga
aatcttcactccaacattaatgaggaacaattgcgacaggtcttcgaaccatttgggcaa
gtggagcttgtccagctgccgttagatccactgactgggctatgcaaaggttttggtttt
gtgcagtttgcacgccttgaagatgcaaaagcggctcagagtttaaatggacaacttgat
attgcagggagagtaattaaggtttcagctgtgactgaccaagcgggtatgcaagttagt
ggagcaactactggagatttggatgatgatgaaggtggaggcttggcactgaatgctagt
tccagagcacttcttatgcagaaattagaccggagtggcattacaaccagtttggctggt
gggatgggcactgctagtttgaatactccggttggaataccagctgtatctgtccttggt
gctgctccagctacagctcctgttctgcaccctaccgtgcctggtcttggttcaattcct
ggggcaactcttccaatttctaccccgtctattgagttggctccacctagtgaatgctta
ttgctgaagaatatgtttgatccagctgtagagacggatcctgattttgatttggatatt
agggatgatgttcaggacgaatgttccaagtttggccaattaaagcacatttttgtagac
aaaaatactgcaggttttgtgtaccttcggtttgatagcataacagcagctatgagtgca
cagaaagcacttcacggaagatggtttgcggggaagatgattacagcaactttcatgacg
ccccagcagtatgaaatgaagttcccaagctag
DBGET
integrated database retrieval system
