Setaria viridis (green foxtail): 117837450
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Entry
117837450 CDS
T07951
Name
(RefSeq) phospholipase D beta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00564
Glycerophospholipid metabolism
svs00565
Ether lipid metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117837450
00565 Ether lipid metabolism
117837450
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117837450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117837450
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117837450
Membrane trafficking [BR:
svs04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117837450
Endosome - Golgi transport
Others
Others
117837450
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
C2
PLDc_2
Motif
Other DBs
NCBI-GeneID:
117837450
NCBI-ProteinID:
XP_034572969
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All DBs
Position
9:55394086..55398712
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AA seq
879 aa
AA seq
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MPQDDDDESITWVVADGAGDAPAVLLHGSLDIWIHDAHNLPNKDILSKTVRDLICKKSKA
SEAMTSDPYVTVQVGSAVVARTFVIPDNENPVWSQHFVVNVAHEAAAVNFVVKDSDVVGA
ELIGVVSIRADRLKTGERVEGTYPVLERNGKECAPGAVLRLSVLYVPVARLTMYHHGVTP
GPDFAGVPRTYFPLRRGGRVTLYQDAHVPDGTLPEIRLGDGACYRHGQCWRDVYDAISQA
RRLIYITGWSVFHTIHLVRDGTGGMPLGDLLRRKSQEGVRVLLLVWDDPTSRSVLGIKME
GYMGTRDEETRRFFKHSSVKILLCPRSAGKRHSWVKQQETGTIFTHHQKTVIVDADAGNH
TRKIVAFVGGLDLCGGRYDTPRHTLFHTLQTFHKEDYYNPNFAVEDARGPREPWHDLHSK
IDGPAAYDVLKNFEERWLKASKRSGAKKLSKLRNDTLLWIEKIPDIAAIDDEVYSNDNDP
ERWDVQIFRSIDSNSVKGFPKDPREATSKNLVCGKNVLIDMSVHTAYVNAIRGAQHFIYI
ENQYFLGSSFNWGSHKDVGANNLIPIEIALKIANKIYANERFSAYIIIPMWPEGNPTGTP
TQRILYWQKKTMQMMYEIIYKALKEVGLDGKYEPQDYLNFFCLGNREAEDTSCSSNGPFS
ASNPQVRPQVVVRFSPADCSTLSKWAKLHAAFFFGEKKNTIMMNSCFSLSTWTFNQDQAR
KNRRFMIYVHSKGMIVDDEYVIIGSANINQRSMEGTRDTEIAMGAYQPQHTWANTLSAPR
GQIFGYRMSLWAEHIGAIEESFTRPESLECMRQVRHIGQQNWEQFVSSHVTKMRGHLLKY
PVSVDPKGKVKPLPGCATFPDLGGNICGSFLNIQENLTI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggacgacgacgacgagagcataacgtgggtggtggcggacggcgccggggac
gcgccggcggtgctgctccacggcagccttgacatctggatccacgacgcgcacaacctg
cccaacaaggacatcctctccaagaccgtgcgcgacctcatctgcaagaagtccaaggcc
tccgaggcgatgaccagcgacccctacgtgacagtgcaggtgggctccgccgtggtggcc
cgcaccttcgtgatccccgacaacgagaaccccgtctggtcgcagcacttcgtggtgaac
gtggcgcacgaggccgccgccgtcaacttcgtcgtcaaggacagcgacgtcgtcggcgcg
gagctcatcggcgtcgtctccatccgcgccgaccgcctcaagaccggggagagggtcgag
ggcacgtacccggtcctggagcgcaacggcaaggagtgcgcgccgggcgccgtgctgcgg
ctgtcggtgctgtacgtgcccgtggcgaggctcaccatgtaccaccacggcgtcaccccg
ggcccggacttcgccggcgtgcccaggacgtacttcccgctgcgccgaggagggagggtc
acgctgtaccaggacgcgcacgtgcccgacggtaccctgccggagatcaggctcggggac
ggcgcctgctaccggcacggccagtgctggcgcgacgtctacgacgccatctcccaggcg
aggaggctcatctacatcaccgggtggtccgtgttccacaccatccacctggtgcgcgac
ggcaccggcggcatgccgctgggcgatctgctcaggaggaagtcgcaggagggcgtgcgg
gtgctgctgctcgtctgggacgatcccacgtcccggagcgtccttggcatcaagatggaa
ggctacatgggcacgcgggatgaagagacacgtagatttttcaagcattcttcagttaag
atactgctttgcccacgatctgctgggaaaaggcacagctgggtgaagcaacaggaaaca
gggactatatttactcatcatcagaaaacagtgatcgtggatgctgatgccgggaaccat
acaaggaagattgttgcttttgtcggaggccttgatttatgcggaggcagatacgataca
ccaagacatactctgtttcatactcttcagacatttcacaaggaggactattacaaccca
aactttgcggttgaagatgcccgtggcccaagagagccatggcatgacttgcattccaag
atcgatggtccggcagcatatgatgtcctgaaaaactttgaggagcggtggttaaaggca
tcgaagcgcagtggggctaagaaattgtcgaaattgcgtaatgatacattgctctggatt
gaaaagatacctgatattgcagctattgacgatgaagtctattcaaatgacaatgatcca
gagagatgggatgttcagattttccgatcaattgattcaaactctgtcaagggttttcca
aaagacccgcgagaagccaccagcaagaatcttgtttgtgggaaaaatgtattgattgat
atgagtgtccatacagcttacgtgaatgcaatccgaggtgctcaacatttcatctacatt
gagaaccagtatttccttggttcttcattcaattggggttcgcataaagatgtcggtgct
aataatttgatacccattgagatagcactcaaaattgctaacaagatttatgcgaatgag
agattctcagcatacataataatcccaatgtggcctgagggtaaccctactggtactccc
acgcaaagaattctttattggcagaaaaagacaatgcaaatgatgtatgagataatttat
aaggcgttgaaggaagtaggattagatggtaaatatgaaccgcaggattacctgaacttc
ttctgccttggtaatcgtgaagctgaggacacttcttgttcttccaatggaccattctca
gccagcaacccacaggtgagaccgcaggttgtagttcggttttctcctgctgattgcagc
acactttccaagtgggcaaagctgcacgctgcatttttctttggggaaaaaaagaataca
attatgatgaactcatgcttctctctctcaacttggacattcaatcaggaccaagctcgg
aagaacaggagatttatgatttatgtgcactccaaaggaatgattgtggatgatgagtat
gtgatcattgggtcggctaacatcaaccagaggtccatggaaggaactagagatacagag
attgcaatgggtgcataccaaccacaacacacatgggcaaatacactttctgcccctcgt
ggacagattttcgggtacaggatgtctttgtgggcggagcatatcggagccatcgaggag
agcttcaccaggccagagagcctggagtgcatgaggcaggtgcggcacattgggcagcag
aactgggagcaattcgtctccagccatgtgactaagatgaggggccatctgctcaagtac
cccgttagtgtcgaccccaagggtaaggtgaagcctctgcccgggtgtgccacgttccca
gacctcggtgggaacatctgcggttcgttcctgaacatccaagaaaacctcacgatatga
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