Setaria viridis (green foxtail): 117837477
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Entry
117837477 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117837477
Spliceosome [BR:
svs03041
]
Common components
Common spliceosomal components
General mRNP proteins
117837477
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_8
DUF3280
Motif
Other DBs
NCBI-GeneID:
117837477
NCBI-ProteinID:
XP_034573007
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Position
9:complement(18791373..18797788)
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AA seq
542 aa
AA seq
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MEFDEYEYLEKAVEPAAPPANGSGSGEKDRGSRRREGGEDRASKRSRSGEDRDSDRDRHR
SGREHRDRDRDRDDGKDKEKSRDSRGKDRDREGRDREKERGDRHRPRDKEVERERRSRSR
SERRRAEEEEMVRELERERERSERGHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSL
KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQA
VMVKPSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP
VDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQVGGAATGDL
DDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGTAGVAIPGPASSVLGAPAATSLLP
PTIPAVGSVPGAPMLPVTSQSTIMSAPTEFLLLKNMFDPTVETDPDFDLDIRDDVQDECS
KFGAVKHIFVDKNTAGFVYLHFDSVTAAAKAQQALHGRWFAGKMITATFMTAQEYSAKFP
NL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctggagaaggcggtggagcccgccgctccgccggcc
aacggctccggctccggcgagaaggaccgcggctcgcgccgccgcgagggcggcgaggac
cgcgcgtcgaagcgctcccgctccggggaggaccgcgacagcgaccgcgaccggcaccgc
agcggccgcgagcaccgcgaccgggaccgggaccgggatgacggcaaggataaggagaag
agccgcgacagccgcgggaaggacagggacagggaggggagggaccgggagaaggagagg
ggtgacaggcaccggcccagagataaggaggtggaacgggagcggaggagtcggagccgt
tcggagcggcgccgcgccgaggaggaggagatggtgagggagctggagcgggagcgcgag
cgcagcgagcgtggccactaccgtgaccgtgatgtcagacggaggaaagatgatggtgct
gagccagaagttgatccagaaagggaccagaggactgtatttgccttccagctatcactg
aaggcagacgaaagagatgtttatgagttcttctcaagggctggaaaggttcgtgatgtt
cgccttattatggaccgaaactcacgccgttctaaaggagttgggtacattgagttttat
gacgtgatgtctgttcccatggcaattgctctgtctggtcaaccgcttcttgggcaagca
gtgatggttaagccatctgaggctgaaaagaacctagttcagtccaatgcgacatctggt
ggtgcggcttcaggtggagcaagaaagttgtatgttggcaatcttcactctaatataact
gaagaccaattgagacaggtattcgaaccatttggacaagtggagcttgttcagctgcct
gtagatccaatgactggactttgcaaaggttatggtttcattcagtttgcacggcttgaa
gatgcaaaagctgcgcagagcttgaatgggcagcttgatatcgctggcagagttattaag
gtttcagctgttactgatcatgtgggagtacaagttggtggagcagctactggagattta
gatgatgatgaaggtggaggcttggcattaaatgcaagctccagagctgctcttatgctc
aaattggacaggagtggcactgcaacaagcttaactggtggtattggcactgctggggtg
gctataccaggaccagcttcatcagttcttggggccccagcagctacttctcttctacca
ccaactattcctgctgttggatcagttcctggggcacctatgcttcctgtcaccagtcaa
tctacgatcatgtcagcacctacagaattcttattgcttaagaacatgtttgaccccaca
gtggagacagatcctgattttgatttggatatcagagatgatgtccaagatgaatgttcc
aagtttggtgcagtgaagcacatttttgttgacaaaaatactgcaggttttgtgtatctg
cactttgatagtgtgactgcagcagcgaaggcccaacaagcacttcatggaagatggttt
gccggcaaaatgattacagcaacatttatgaccgcgcaggagtacagtgcgaagttccca
aacttgtga
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