Setaria viridis (green foxtail): 117837528
Help
Entry
117837528 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X2
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117837528
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117837528
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117837528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-RING_2
DUF6274
Motif
Other DBs
NCBI-GeneID:
117837528
NCBI-ProteinID:
XP_034573078
LinkDB
All DBs
Position
9:969680..972559
Genome browser
AA seq
191 aa
AA seq
DB search
MSSSSSASAAPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWHHGPAVQACKCPICR
RLINLLVPAPLSDQEDDPQVGRILGEIQHYNCIFGGAPRSLTQRLQDLPFFIRRLFRELL
DPQRTLPLVFRARMMMMVALSAIYVLSPVDILPESVLGLFGFVDDLLILVIVFLHLAAVY
RSLLLYRHGGQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcctcgtcggcgtcggccgcgccgccggaggacgacgtctgctccgtctgc
cacgaccgcttccggatcccgtgccaggcaaactgctcccattggttctgcggagagtgc
atcatccgtgtttggcatcatggacctgctgtacaggcttgcaagtgtcccatttgtcgc
cgccttataaatctactggtacctgctcctttatcagaccaggaggatgatccacaagtt
ggccgtattttgggagagattcagcactataactgtatatttggtggagcaccacgcagc
ctgactcagaggttgcaagacctacccttcttcatccgaagactgttcagagaactattg
gatccccagcggactctcccacttgtgttcagggcacggatgatgatgatggttgcattg
agtgcaatttatgtgctgagccctgtcgacattctccctgaaagtgtgctggggctcttt
ggattcgttgatgacctgctgattctggtgatcgtgttcctccacctcgccgccgtctac
cggtcgttgctcctgtaccgccatggggggcagtag
DBGET
integrated database retrieval system
