Setaria viridis (green foxtail): 117837561
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Entry
117837561 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K23288
syndetin
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117837561
Membrane trafficking [BR:
svs04131
]
Protein recycling
Others
EARP complex
117837561
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
117837561
NCBI-ProteinID:
XP_034573136
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Position
9:complement(37851695..37864222)
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AA seq
1085 aa
AA seq
DB search
MRRDAPPPPTAHSASSSSLFGGGEQLFESGPSPLVFLPLLLIQGGGMDLSRVGEKLLSSV
RSARSLGLIPPIPAAPPPRPEVPERAAAAAAAARAIAGLPPHERINLPANSEDLVSIYGS
NPQGEPVEELEEVFYEEEFDPINYILQSIPEEGGDATYFDKQSTLRLAQLDKIAERLSHH
VMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHITSSKNELSRDLVVNVKSKKKQALL
DVLPILTELRHALDMQMELETFVEKDNYFQAFQLLPEYLQILENYSGLSAVQEMGRGIEA
WLARTIQKLDTHLLGICQIFNEESYITVVDAYALMGDVSGMAEKMQSFFLQEVLSRTHYV
LKEMLEEEVGNNTQKNRFTYSDLCVQVPEPKLRPCLLKTLESLFSLMCSYYAIMSFSPGD
KNIESKGPHLADKNETSQNNDEALVDSGGGQSIAAVIQDGSAAERSDRASSSEVSNPDAS
TSGTDSPFYQLRTDATKLVAQTFQRGRRNLWQLATSRLSVLLSSSAVCSTSIYQFLKNYE
DLAIFILAGEAFCGFEASEFRQKLKTVCLNYVVSFHRQNVYALKMVLEKESWTIMSAEAS
QIISLAGLTGDGAALCSPTSRSSKLPINSYHANSTTANPGKQKLGFASWLKIENPFSFRL
ENGSAESPKSNMIFDSSVSNNHGNGNNSSLDEENEDLLADFIDEDSQLPSRIPKAKIVKG
NYSHWKDGDISSQTGSSLSLLRMMDKYARLMQKLEIVNVELFKGISQLFGIFYHYVYETF
GHQDRSQSGRHLPDHQSSRLKAALSKITQDSDQWTKPHNVSYSPSSPLSMSSTFGQMDVM
PTAPPSSMFTSYGLKERCAAAETVSLVARVLNRSKAHLHSVLSKNNTNAVEEFYRTLVDS
VPDLTEHIHRMSARMLLHIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRLDH
GGISKELQHLLMEYGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSANV
RPKLQTVDTFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRLETVEK
IEAAS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgacgcgccgccgccacccaccgcccactcagcctcctcgtcatccctcttc
ggcggcggcgagcagctgttcgagtccgggcccagcccgctcgtcttcctgccccttctc
ctgatccagggcggcggcatggacctctcccgcgtcggcgagaagctcctcagctccgtc
cgctccgctcgctccctcggcctcatccccccgatccccgccgcgccccctccccgcccg
gaggttccagaacgagctgcggcggcggcagctgctgcacgtgcgatcgcggggttgcca
ccgcatgagaggatcaacctgccggccaattcggaggacttggtctccatctacgggagt
aacccacagggggagcccgtggaggagctcgaggaggtgttttatgaggaggagttcgat
ccaataaattacattctgcaaagtattccagaagaaggcggtgatgccacctattttgat
aagcagtctacattgagattagcgcagcttgacaagattgcagaacgattgtcacatcat
gttatgggccaccatgaagaaatggtgaaggggatgcagttagtgatggaactagaacaa
gacttaaaggttgcaaatgtaatatgcatgaatggacgaaggcatataacctcttcgaag
aatgagttgtcgagggatctggttgtcaatgtaaaatcaaagaagaaacaagctttgctg
gatgttcttcctattcttacagagcttcgtcatgcactagacatgcagatggaacttgaa
acttttgttgagaaagacaattactttcaggcgttccaattattgccagaatatttgcaa
attttggagaattattcaggcctttctgctgtacaagaaatgggacgtgggatcgaggca
tggttagctcggacaatccaaaagttggacacccatttacttggtatttgtcagattttc
aatgaagaaagctatataactgttgttgatgcatatgcactgatgggtgatgttagtggc
atggctgaaaagatgcagagtttcttcttgcaggaagtactctctcggacacattatgtc
ctgaaagaaatgttggaagaggaggttggaaataatacgcagaaaaataggtttacatat
agtgatctttgtgttcaagttcctgagcccaaacttcgcccctgcttgttgaaaaccctt
gagagcttattttcattgatgtgctcatattatgctattatgagcttttccccaggagat
aagaatattgagtccaagggcccgcatctagcagacaagaatgagacatctcagaataac
gatgaagctttagttgattcaggagggggtcagtcaattgcagcagtcattcaggatggt
tctgcagctgaaagaagtgacagagcatcatcatccgaggtcagcaatcctgatgctagt
acatcaggaacggattctccattctatcagctgaggacagatgctacaaaacttgttgcg
caaacatttcaaagaggacgaagaaatctttggcagctggcaacaagtcgcttatctgtt
ttattatctagttcagctgtttgttcaactagcatataccaattcctgaagaactatgaa
gatcttgcaattttcattttggcgggtgaagcattttgtgggtttgaagctagtgagttc
cgccagaagttgaagactgtctgtttgaactacgtagtgtcctttcaccggcaaaatgta
tatgcacttaagatggtactggaaaaggaatcttggacaataatgtctgctgaagcgtcg
cagataattagtttagctggcctaactggtgacggtgctgcactgtgctctcctaccagt
agaagttccaagttgccaataaattcttaccatgcgaattcaactacagccaatccggga
aagcaaaagctcggattcgcttcttggcttaagatcgaaaatccattttcttttaggcta
gaaaatggctctgccgaatccccaaagtccaatatgattttcgactcatcagttagcaat
aatcatggcaatgggaataattcatctctcgatgaagagaatgaagaccttctagcggat
ttcatcgatgaagatagtcagttgcctagtaggataccaaaagcaaaaattgtaaaaggc
aattattcacattggaaagatggagatatttcatcgcagacaggctcgtcactttctctg
ttaaggatgatggacaaatacgccaggctaatgcaaaagctggaaattgtcaatgttgag
ctttttaagggtatctcccaactgtttggcatcttttatcactatgtatatgagacattt
gggcaccaagacaggagtcaaagcggcaggcatttaccagatcatcaatcatctcggctt
aaagctgctttatcaaaaataacacaagactctgatcagtggacaaaaccacataatgtt
tcatattcaccttcatcccctttgtcaatgagttcaacttttggtcaaatggatgtgatg
cctactgcgcctcccagttcaatgttcacttcctatgggttaaaggagagatgtgcagct
gctgaaacagtatcgttggttgctcgagttttgaacagatctaaagcccatctgcactca
gtgttgtctaaaaataacactaatgctgttgaagagttctatagaacactggtggattct
gttccagatttgactgagcacattcacagaatgagtgcacggatgcttttgcatattgat
gggtatccagataagattgcaaatgctaaatgggaggtgaaggagcttggaatagagcac
aatggatatgttgatttgttattgggtgagttcaaacactacaaaacaagattagaccat
ggaggaatttctaaggagctccaacatctgttgatggagtacggtatagagagcatagca
gaagtcttggtggaaggtctctctagagtgaaacggtgcactgatgaagggcgtgcattg
atgtcgcttgacctgcaggtactaattaatgggttgcagcacattgtatcagcaaatgta
aggccgaagctgcaaactgtggacactttcataaaggcctactatttgccggagaccgag
tacgttcactgggcacggtctcatccagaatatagcaaaagtcaggtcgtcgggttggtt
aaccttgtggccaccatgaaaggatggaaacggaagacgagactagaaacagttgagaag
attgaggcggcttcgtag
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integrated database retrieval system
