Setaria viridis (green foxtail): 117837703
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Entry
117837703 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117837703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117837703
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117837703
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
HECT type E3
117837703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
117837703
NCBI-ProteinID:
XP_034573331
LinkDB
All DBs
Position
1:complement(125994..135313)
Genome browser
AA seq
1840 aa
AA seq
DB search
METRSSSRKRAAAAAAAAAASSSSSASKRSRPNTRRNSSTSSPAAAPVPAMEPSPSSRRR
SRAAADKGKDPDPSSSSDPPPPAPDDDSDAPFPQSFTSASTALQGLLRRLGAGLDDLLPS
SSSAPSSATSAHLKRILAGLQAHGDESRQLQSLMQLCEMLSIGTEDSLAAFPVDAFVPIL
VGMLGREDEPATAGASPDVMLLAARALANLVDVLPSSCSAVVHYGAIQCFCARLLTIEYM
DLAEQSLQALKKISLEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANICRKLPSDA
SEFVMEAVPLLTNLLNHHDSKVLEHASVCLTRIAEAFAHYPEKLDELCNHGLVAQAASLI
SVGNSSGQASLSTSTYTGLIRLLSICASGSLLAVKTLLLLGISGTLKDILSGSGLISGTS
VAPALTRPADQMFEIVSLADDLLPHMPARIINLPTYYHAYKSSSTKKSASIKQDGAGSSS
TENERSGRERLLREHPELLQQFGMDLLPTMTQVYGSSVNAPIRHKCLSIIGKLMYYSSAE
TIQSLLGTTNISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFSKLFVREGVVHAVES
LICAESSNALPSQVPPQDKDNDSPMPSRSRRQRRRGGAVPAENSSLDESNSSNLGVTCST
TSTSEVPNTSLRFAVSDHAKSFKDKYFPTDTDSSDIGVTDDLLKLRALCTKFNTAIENAK
TKAKGKSKAVSADCFDISFDVEEQLDEVISEMLGELSKVNGVSTFEFIRSGVVTSLLDYL
SCGTFGKEKVSEGNLPQLRQQALRRYKSFISVALSIDHERDGTPMALLVQKLQSALSSLE
RFPVVLSQSSRIGIGGSRLTSGLSALAQPFKLRLSRAQGEKSLRDYSSNIVLIDPFASLA
AVEDFLWPRVQRSEVASKPIVPSGNNSESGVPGTTAGASLTAATAHSGRRPTTRSKSSAA
SSGTSKKDAHDESTSTAKGKGKAIVKPNSDESKGPNTRNAARQKSASEKDSEMKRAHGHS
SSEDEELDTSLVEIDDALMIDDDDISEDDDDDHEVLQEGSLPICSQDGVHDVKLGDADEN
IGSASFSQAQPSSGSIARNTSSRGPDSSEFRSASTFGSRGAMSFVAATMAGLASVGGRSV
RGSRDRRGLSLGGSMSDHNKLVFTAGGKQLSKHLTVYQAIQRQLMLDEDDEERFNGSDLS
NDGNRFWGDVFTITYQKADNQAEKGSQGGSTSLNSKSDSCRSISEMQGVSLLDSILQGEL
PCDLERTNSTYNILALLRVLDGLNQLSSRLRAQGASDDFAEGKIRTLDELYRTGAKVPSE
EFVNSKLTPKLARQMQDVLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRA
LNRLQQQQSDNHSSGGEREVRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEVEYF
GEVGTGLGPTLEFYTLLSHELQSSQLGLWRSTSPYDSGLQIDRSDAINLDPEDGLSGKEL
NSDLTGDGRHLIQAPLGLFPRPWPPKADASEGTRFFKVLEYFRLIGQVMAKVLQDGRLLD
LPLSTAFYKLILGQELDLFDIVSFDSEFGKTLQELRVLVERKKFLESTPGENQLEVADLR
FRGAAIEDLCLDFTLPGYPDYVLKEGEGSTIVNIYNLEEYISLLVDATVKSGIKRQIEAF
RSGFNQVFDISSLQIFSPQELDYLICGRQEIWEPESLVDNIKFDHGYTAKSPAIVNLLEI
MVEFTPEQQHAFCQFVTGAPRLPPGGLAALSPKLTIVRKHPSSVVNTSNSTGVTEPADDD
LPSVMTCANYLKLPPYSTKEIMRKKLLYAILEGRGSFDLS
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacgcagcagcagccgcaagcgcgcagccgcagcagcagcagccgccgccgcc
tcctcctcctcatcagcctccaagcgctcccgccccaacacccgccgcaactcctccacc
tcctcccccgccgccgcccctgtccccgcgatggaaccctcgccgtcctcccgccgccgc
tcccgcgccgccgccgacaagggcaaggaccccgacccctcctcctcctccgacccccct
ccccccgcccccgacgatgactccgacgcccccttcccccagtccttcacctccgccagc
accgccctccagggcctcctccgcaggctcggcgccggcctcgacgacctcctcccctcc
tcctcctccgccccctcctccgccacctccgcgcacctcaagaggatcctcgccggcctc
caggcccacggcgacgagtcgcgccagctccagtccctcatgcagctctgcgagatgctc
tccatcggcaccgaggactccctcgccgccttcccagtcgacgccttcgtccccatcctc
gtcggcatgctcggccgcgaggacgagcctgccaccgccggcgccagccctgacgtcatg
ctgctcgccgcgcgggcccttgccaacctcgtcgacgtgctcccctcctcctgctccgcg
gtcgtgcactacggggccatacagtgtttctgtgctcgcctgctaaccatcgagtacatg
gacctcgccgagcagtctctacaagctcttaagaagatctctctggagcacccaaccgcg
tgtctgcgtgctggggcgctaatggctgtcctatcgtatctcgacttcttctccactggt
gttcagagagtagcattgtctaccgctgcaaatatctgcaggaagctgccgtccgatgct
tccgagtttgtcatggaagctgtccctctgctcacgaatctcctgaaccaccatgattcc
aaggtactggagcatgcttctgtttgtttgacacgcattgctgaagctttcgcccattac
ccggaaaagcttgatgagctctgcaatcacggattggttgctcaagctgctagcttgata
tctgttggcaactcctcaggccaggcatcactgagtacatccacatacacaggcttaatc
cgtcttctctcaatatgtgcaagtggatcactgctggcagttaaaacactacttcttctt
gggatcagcggcactcttaaagacatcctttctggctctggtttgatttctggaacgtca
gtggcccctgctctaacaaggcccgctgatcagatgtttgagatagtgagccttgctgat
gatttgcttccacatatgcctgcgagaatcatcaatttaccaacatactaccatgcttat
aaaagctcttcaacaaagaaatctgcttccatcaaacaagatggggctggttcaagttca
acagaaaacgagaggtctggccgtgagaggctattgcgtgagcaccctgaacttctacag
cagtttggtatggatttgttaccgacgatgacacaggtgtatggttctagtgtaaatgca
ccgatacgtcacaagtgcttatcgattattgggaagttaatgtactacagctccgctgaa
acaatccaatctctccttggcacaacaaacatatccagcttcctcgcaggcattcttgca
tggaaagatccccaagtgttgattcctgctcttcagatagcagaaataatgatggaaaag
cttccagagacattttctaagctgtttgtgagggaaggtgttgttcatgctgtggagtca
cttatatgtgcagaatcctccaatgcactgccttctcaggtaccaccgcaggataaagat
aatgattctcccatgccgtcacgttctaggcgtcaacgcaggcgtgggggtgctgtgcca
gcagaaaacagttcattagatgaatcaaacagttccaatcttggggttacctgctcaaca
acaagcacttccgaagttccaaacaccagcctgcgatttgcagttagcgatcatgcaaag
tctttcaaagataaatacttcccgacggacactgattcaagtgatattggagttactgat
gaccttcttaaactgagagcactctgcacaaagttcaatactgcaattgagaatgccaaa
acaaaagccaaagggaaatcaaaagctgtaagtgccgattgttttgacatctcatttgat
gtggaagaacaattagacgaagtgatatctgaaatgctcggtgagcttagcaaagttaat
ggtgtctccacatttgagttcattagaagtggagttgtcacatcattgcttgactatttg
tcctgtgggacgtttgggaaggaaaaggtatctgaaggaaacctaccacagcttcgtcag
caggcccttaggcgatacaagtccttcatatctgttgccctttctattgatcatgaaagg
gatggaactcccatggcactgttggttcaaaaactacaaagtgcattgtcttcgttggaa
cgtttccccgttgtgcttagccagtctagcaggattggtattggaggctcccgtctgacc
tcaggtcttagtgctctggctcagcccttcaagttgcgtctgtcacgagctcaaggtgaa
aaatcacttcgggattattcatcaaatattgtgcttattgacccatttgccagtctagca
gctgttgaagacttcctttggcccagagttcagcgcagtgaggttgcttcgaagcctata
gttccatctggaaataattctgaatcaggggttcctggcaccacagctggtgcatcatta
acagctgcaacagctcattctggtcggcgtccaacaacaagatcaaaatcatctgctgca
agtagtggtacatctaaaaaggatgctcatgatgaaagcactagtactgccaaaggaaaa
ggcaaagctatagtaaaaccgaactcagatgaatcaaagggacctaataccaggaacgct
gcccgccaaaaatctgcttcagagaaggattcagaaatgaagcgagcgcatggtcacagt
agctctgaggatgaagagcttgacacatctctcgttgagattgatgatgctttaatgatc
gatgatgatgacatttcagaggatgacgatgatgatcatgaggttctccaagaagggtct
cttcctatctgttctcaagatggtgtgcatgacgtgaaattgggtgatgctgatgagaac
attgggtcagccagttttagccaggcgcagccgtcatctggctccattgctagaaacaca
tctagcaggggaccagattcttctgaatttcgaagtgcaagcacatttggttcacgaggt
gcaatgtcatttgttgctgcaacgatggctgggctggcttctgtcggtggtcgcagtgtt
agaggtagccgagatcggcgtggtctgtcacttggaggtagcatgagtgatcacaataaa
ctcgtattcactgctggtgggaagcagctcagcaaacatttgacagtgtatcaagctatc
caacgtcaattgatgcttgatgaggatgatgaagaaaggttcaatggatctgatctatcc
aatgatggaaaccgcttctggggtgatgtgttcacaataacgtaccagaaggctgataac
caagctgagaagggatcccaggggggttccacctcattaaactcaaaatcagattcttgc
agatctatctcggaaatgcagggtgtttctcttcttgatagcatcttacaaggagaactc
ccttgtgatcttgagagaacaaactcaacatacaacattttagcactgttacgtgtactg
gatgggcttaatcagttatcctctcgtttaagagcacaaggagcatctgatgattttgct
gagggaaaaatcaggacccttgatgagctatatagaactggagccaaggtaccttccgag
gagtttgtcaatagtaagttgacgccaaagcttgctcggcaaatgcaggatgttcttgca
ctctgtagtggcagtttaccttcttggtgctatcaaatgaccaaggcctgcccatttctg
tttccttttgagacaaggaggcagtacttctactccacagcctttgggttgtcacgagca
ttgaatcgactccagcaacagcagagtgacaatcacagctctggtggtgaaagagaggtc
cggtttggcaggttacaacgccagaaagttcgtgtttcccgtaaccgtattctggattct
gctgctaaagttatggagatgttctccagtcagagggctgttcttgaggtggaatacttt
ggtgaagttgggaccgggctggggcctactttggagttttatactcttttaagccatgaa
ctacaaagttctcagctggggttatggagatctacttctccatatgattcaggattgcaa
attgataggagcgatgcaattaatttagaccctgaagatggcttatcaggaaaagaactc
aactcagacttaactggtgatggcaggcatttgatacaagctcctctcggattgtttcct
cggccttggccacctaaagcggatgcttcagaaggtaccagattcttcaaagttttggag
tatttccgcttaatcggtcaagtgatggcaaaagtcttgcaagatggcagacttttagat
ttgcctttatcaactgcgttttataagctgatccttggacaggagcttgatttgtttgac
atagtctcatttgattctgagtttgggaagacattgcaagaactgcgagttcttgttgaa
cgaaagaagttccttgagtccactcctggcgagaatcagcttgaagttgcagacttgcgt
ttccgtggtgctgctattgaagatttgtgtttagattttactcttccgggttatcctgat
tatgttcttaaagagggtgaaggaagcacaattgtcaacatttacaacttagaagagtat
attagtttgctagtggatgctacagttaagtcagggataaagcgacagattgaggcattt
agatcagggtttaatcaggtttttgacatctcatccctccaaatattttcacctcaagaa
cttgactatctaatatgtggccgacaagaaatttgggagccggaatccctggtggataac
ataaaatttgatcatgggtatactgctaaaagtcctgcgatcgtgaatctgcttgagatt
atggtggaattcacccctgagcagcagcatgcgttctgccagtttgtaactggtgctcct
cgccttccacctggtggtttggcggcccttagtcccaagcttacaattgttaggaagcat
ccttcaagtgtggtaaatacttcaaattcaactggggtgacagagcctgcggatgatgat
ttgcctagtgtgatgacgtgcgctaattatctgaagctgcctccgtactccacaaaagaa
atcatgcgcaagaagctgctttatgcaatcctggaaggccgaggatcatttgatctttca
taa
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