Setaria viridis (green foxtail): 117837740
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Entry
117837740 CDS
T07951
Name
(RefSeq) coatomer subunit gamma-1
KO
K17267
coatomer subunit gamma
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117837740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117837740
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117837740
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117837740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
HEAT_2
Cnd1
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
117837740
NCBI-ProteinID:
XP_034573382
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All DBs
Position
9:49544393..49551733
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AA seq
962 aa
AA seq
DB search
MDPSAKRARNRQPESSVASRVPHRTAGQGQPSTRGKTISSRSIVPSFPARANPATHRHST
RRRMPRSLVEGDLAGPEMAQPYMKKDDDDDEEVEYSPFFGIEKGAVLQEARAFHDPQLDV
RRCSQVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSSDAGLRRLVYLMIKELSPSSDE
VIIVTSSLMKDMNSKTDMYRANAIRVLCRIIDGTLLTQIERYLKQAIVDKNPVVASAALV
SGIHLAQANPEIVKRWSNEVQEAVQSRAPLVQFHGLALLHQIRQNDRLAVSKLVSSLTRG
SVRSPLAQCLLIRYASQVMRESSTNTQNGDRLFFDFLESSLRHKSDMVMLEAARKITEMD
VTSRELAPAIAVLQSFLSPSSKPVLRFAAVRTLNKVAMIRPLAVTNCNVDLESLISDTNR
SIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSML
NFLSNSLREEGGFEYKKAIVDSIVTLISEIPDAKEIGLLHLCEFIEDCEFTYLSSQILHF
LGNEGPRTSDPSRYIRYIYNRVILENATVRASAVSTLAKFGALVDTLKPRIFVLLRRCLF
DTEDEVRDRATLYLQTLGGEVVIGNNEKDAKDFLFGSFDVPLANLEASLRTYEPSEEPFD
ISLVSRDIRSLPLQEKKAPGKKAPAAAASAPVSAVDAYEKMLSSIPEFSGFGRLFKSSEP
VELTEAETEYAVNVVKHIYDSYVVLQYNCTNTIEEQLLENVTVCVDSSVAEEFSEICSKP
LASLPYNSTGQIFVAFEKPERLPAIGKMFNLLKFTVKEVDTFTGEADEDGVDDEYQLEDF
EIFAADYMLRVAVSNFRNAWENMDPESERVDEYGLGVRESLAEAVSAVINILGMQPCEGT
EVVPRNARSHTCLLSGVFIGDVKVLVRLSFGLSGPNEVAMKLAVRSDDPEVSDKIHEIVA
SG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagcgcaaaaagggcgcgcaaccgccaaccagagtccagcgtcgcgtcccga
gtcccgcatcgcaccgcaggccaaggccagccttcgacccggggcaaaacgatctcgtct
cggtccatcgttccttccttccccgcccgagccaaccccgccacccaccggcacagcacc
cggcgtcgcatgcctcgctccctcgtcgaaggtgacctggccggaccggagatggcgcag
ccgtacatgaagaaggacgacgacgacgacgaggaagtcgaatattcgccattctttggg
atcgagaagggagctgttctgcaggaggcgcgggctttccacgatccacaacttgatgtc
agacggtgctcgcaagtcatcaccaagctattatatttgctcaatcaaggagagacattc
acaaaggttgaggccaccgaagtcttctttgcagtaacaaagttgttccagtctagtgat
gctggtcttaggaggctggtgtatttaatgatcaaagagctttctccatcatcagatgag
gtcatcatagtcacaagctcattgatgaaggatatgaacagcaagacagatatgtaccgt
gccaatgctattagagttctttgtagaataattgatggcaccctactaactcaaattgaa
agatatttgaagcaagctattgttgacaagaatccagtggttgctagtgctgctcttgtt
agtggcatccacctggctcaggcaaacccagaaattgtgaaaagatggagcaatgaagtc
caagaagctgttcaatcaagagctccgcttgtccagtttcatggtcttgctcttcttcac
cagatcaggcagaatgatcggttggctgttagcaagctagtttccagtttgacaagggga
tctgtccgttctcctcttgcacaatgtcttctgattcgttacgcaagtcaggttatgcgt
gagtcaagcacgaacacacaaaatggtgaccgtctattttttgattttctggaatcatcc
ctcagacataaatcagatatggtgatgttagaagctgcacggaaaataactgagatggat
gttacaagtcgtgaattggccccagcaattgccgtgttgcagtcatttttgagtccatca
tccaagcctgtgcttcgatttgctgctgttcggactctcaataaggttgccatgatacgc
cctctggcggtgacaaactgcaacgtggacttggagagtttgatctcagacacgaatagg
agtatagcaaccctggcaatcactactcttcttaaaactggcaatgaatcaagcgtggat
cgcctcatgaaacagattaccaatttcatgtctgacatagcagatgaattcaagatagtt
gttgtcgaagctatacggtctctgtgcctgaagttcccgctcaaatatcgctcaatgttg
aattttctgagcaacagtttaagagaagaaggggggttcgagtataaaaaggccatagtg
gattccatagttactctgatcagtgagataccagatgccaaagaaattggcctgctacat
ctctgcgaattcattgaagactgcgaattcacatatctttctagtcagatattgcatttt
ctgggaaatgaagggccaaggacatcagatccaagcaggtacattcgctacatctacaac
cgtgtgatattggaaaatgccactgttcgtgctagtgctgtcagcacgctggcaaagttt
ggtgccctagttgacacgctcaagcctcggatcttcgttctcctgcgacgatgcctgttt
gatactgaagatgaggttcgtgatcgtgctacactctatctccaaactcttggtggtgaa
gttgtcattggtaacaatgagaaggatgcgaaagacttcctatttggatcttttgatgtg
ccacttgccaacttagaagcaagcctaagaacctatgaaccttcggaggagccttttgac
atttcattggtgtcgagagatatcaggtcgctaccacttcaagagaagaaggcccctgga
aagaaggcacctgctgccgcggcctctgcacctgtttcagctgttgatgcttatgagaag
atgctttcatccattcctgagttctctgggtttggaagactcttcaagtcctctgaaccc
gtggagctgacggaggcagaaactgaatatgctgttaatgtggttaagcacatttatgat
agctatgttgtattgcagtacaattgtacaaacactatagaagaacaactgctagaaaat
gtcactgtttgcgttgactcctcagttgctgaggagttttcagaaatttgttcaaagcct
ctggcaagcttgccttataattctactgggcaaatttttgttgcttttgaaaagccggag
cgcctacctgctattggaaaaatgtttaatttgctgaagtttactgttaaagaggttgac
acatttacaggggaagctgatgaggatggtgtggatgatgaataccagttagaggacttc
gaaatttttgcagctgattatatgctgagggttgctgtctcaaacttcagaaatgcctgg
gaaaatatggacccagagagtgagcgtgttgatgagtatggtcttggggttagagagagc
ttggctgaggctgtcagtgctgttattaacatccttgggatgcagccgtgtgagggcact
gaggttgtaccgagaaatgcaagatcccacacctgcctgctttctggtgtgtttatcggt
gatgtgaaggttctagtcaggttgtcatttggactcagtgggcccaacgaagtggcgatg
aagctggctgtcagatcagatgaccctgaagtcagtgacaagattcacgagattgtggcc
agtggatga
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